Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15180 | 45763;45764;45765 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
N2AB | 13539 | 40840;40841;40842 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
N2A | 12612 | 38059;38060;38061 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
N2B | 6115 | 18568;18569;18570 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
Novex-1 | 6240 | 18943;18944;18945 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
Novex-2 | 6307 | 19144;19145;19146 | chr2:178621180;178621179;178621178 | chr2:179485907;179485906;179485905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/Y | None | None | 0.989 | N | 0.435 | 0.291 | 0.264081493735 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1954 | likely_benign | 0.1639 | benign | -0.304 | Destabilizing | 0.051 | N | 0.23 | neutral | N | 0.456917497 | None | None | N |
D/C | 0.7616 | likely_pathogenic | 0.6795 | pathogenic | 0.133 | Stabilizing | 0.998 | D | 0.439 | neutral | None | None | None | None | N |
D/E | 0.1896 | likely_benign | 0.1412 | benign | -0.334 | Destabilizing | 0.012 | N | 0.25 | neutral | N | 0.453875368 | None | None | N |
D/F | 0.6744 | likely_pathogenic | 0.6338 | pathogenic | -0.35 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
D/G | 0.1416 | likely_benign | 0.1293 | benign | -0.506 | Destabilizing | 0.454 | N | 0.36 | neutral | N | 0.455886189 | None | None | N |
D/H | 0.34 | ambiguous | 0.3008 | benign | -0.343 | Destabilizing | 0.966 | D | 0.369 | neutral | N | 0.446495073 | None | None | N |
D/I | 0.5909 | likely_pathogenic | 0.5143 | ambiguous | 0.179 | Stabilizing | 0.974 | D | 0.453 | neutral | None | None | None | None | N |
D/K | 0.4171 | ambiguous | 0.3692 | ambiguous | 0.291 | Stabilizing | 0.728 | D | 0.377 | neutral | None | None | None | None | N |
D/L | 0.5403 | ambiguous | 0.488 | ambiguous | 0.179 | Stabilizing | 0.842 | D | 0.435 | neutral | None | None | None | None | N |
D/M | 0.7256 | likely_pathogenic | 0.6288 | pathogenic | 0.429 | Stabilizing | 0.998 | D | 0.423 | neutral | None | None | None | None | N |
D/N | 0.0824 | likely_benign | 0.0701 | benign | 0.048 | Stabilizing | 0.005 | N | 0.117 | neutral | N | 0.379024742 | None | None | N |
D/P | 0.9177 | likely_pathogenic | 0.8798 | pathogenic | 0.04 | Stabilizing | 0.974 | D | 0.383 | neutral | None | None | None | None | N |
D/Q | 0.3835 | ambiguous | 0.3181 | benign | 0.067 | Stabilizing | 0.904 | D | 0.355 | neutral | None | None | None | None | N |
D/R | 0.4664 | ambiguous | 0.4445 | ambiguous | 0.371 | Stabilizing | 0.949 | D | 0.399 | neutral | None | None | None | None | N |
D/S | 0.1488 | likely_benign | 0.1163 | benign | -0.075 | Destabilizing | 0.525 | D | 0.353 | neutral | None | None | None | None | N |
D/T | 0.3339 | likely_benign | 0.2481 | benign | 0.078 | Stabilizing | 0.842 | D | 0.379 | neutral | None | None | None | None | N |
D/V | 0.356 | ambiguous | 0.3044 | benign | 0.04 | Stabilizing | 0.801 | D | 0.441 | neutral | D | 0.532264452 | None | None | N |
D/W | 0.9161 | likely_pathogenic | 0.9069 | pathogenic | -0.251 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | N |
D/Y | 0.2537 | likely_benign | 0.256 | benign | -0.123 | Destabilizing | 0.989 | D | 0.435 | neutral | N | 0.457358743 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.