Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15183 | 45772;45773;45774 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
N2AB | 13542 | 40849;40850;40851 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
N2A | 12615 | 38068;38069;38070 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
N2B | 6118 | 18577;18578;18579 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
Novex-1 | 6243 | 18952;18953;18954 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
Novex-2 | 6310 | 19153;19154;19155 | chr2:178621171;178621170;178621169 | chr2:179485898;179485897;179485896 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.046 | N | 0.262 | 0.039 | 0.20549828249 | gnomAD-4.0.0 | 1.59365E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78878E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.2758 | likely_benign | 0.2233 | benign | -0.901 | Destabilizing | 0.91 | D | 0.397 | neutral | None | None | None | None | I |
L/C | 0.7475 | likely_pathogenic | 0.709 | pathogenic | -0.543 | Destabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | I |
L/D | 0.7824 | likely_pathogenic | 0.7437 | pathogenic | -0.518 | Destabilizing | 0.993 | D | 0.615 | neutral | None | None | None | None | I |
L/E | 0.4363 | ambiguous | 0.3755 | ambiguous | -0.615 | Destabilizing | 0.993 | D | 0.62 | neutral | None | None | None | None | I |
L/F | 0.2271 | likely_benign | 0.2051 | benign | -0.894 | Destabilizing | 0.991 | D | 0.395 | neutral | N | 0.457157006 | None | None | I |
L/G | 0.6342 | likely_pathogenic | 0.5486 | ambiguous | -1.09 | Destabilizing | 0.993 | D | 0.618 | neutral | None | None | None | None | I |
L/H | 0.3231 | likely_benign | 0.3201 | benign | -0.37 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
L/I | 0.1074 | likely_benign | 0.0994 | benign | -0.515 | Destabilizing | 0.885 | D | 0.333 | neutral | N | 0.452923142 | None | None | I |
L/K | 0.2532 | likely_benign | 0.2232 | benign | -0.523 | Destabilizing | 0.993 | D | 0.549 | neutral | None | None | None | None | I |
L/M | 0.161 | likely_benign | 0.1447 | benign | -0.377 | Destabilizing | 0.993 | D | 0.436 | neutral | None | None | None | None | I |
L/N | 0.5105 | ambiguous | 0.4362 | ambiguous | -0.212 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
L/P | 0.2452 | likely_benign | 0.1964 | benign | -0.611 | Destabilizing | 0.128 | N | 0.38 | neutral | None | None | None | None | I |
L/Q | 0.1795 | likely_benign | 0.1657 | benign | -0.497 | Destabilizing | 0.998 | D | 0.548 | neutral | None | None | None | None | I |
L/R | 0.2049 | likely_benign | 0.2039 | benign | 0.118 | Stabilizing | 0.993 | D | 0.553 | neutral | None | None | None | None | I |
L/S | 0.3094 | likely_benign | 0.268 | benign | -0.664 | Destabilizing | 0.991 | D | 0.518 | neutral | N | 0.453918584 | None | None | I |
L/T | 0.2804 | likely_benign | 0.2321 | benign | -0.657 | Destabilizing | 0.986 | D | 0.401 | neutral | None | None | None | None | I |
L/V | 0.1184 | likely_benign | 0.1038 | benign | -0.611 | Destabilizing | 0.046 | N | 0.262 | neutral | N | 0.447697883 | None | None | I |
L/W | 0.403 | ambiguous | 0.4207 | ambiguous | -0.892 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
L/Y | 0.5193 | ambiguous | 0.4901 | ambiguous | -0.655 | Destabilizing | 0.998 | D | 0.456 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.