Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15184 | 45775;45776;45777 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
N2AB | 13543 | 40852;40853;40854 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
N2A | 12616 | 38071;38072;38073 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
N2B | 6119 | 18580;18581;18582 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
Novex-1 | 6244 | 18955;18956;18957 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
Novex-2 | 6311 | 19156;19157;19158 | chr2:178621168;178621167;178621166 | chr2:179485895;179485894;179485893 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | rs374605722 | None | 0.002 | N | 0.117 | 0.08 | 0.119812018005 | gnomAD-4.0.0 | 1.59363E-06 | None | None | None | None | N | None | 5.67279E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1546 | likely_benign | 0.1407 | benign | -0.14 | Destabilizing | 0.329 | N | 0.179 | neutral | None | None | None | None | N |
Q/C | 0.7385 | likely_pathogenic | 0.7138 | pathogenic | 0.151 | Stabilizing | 0.995 | D | 0.203 | neutral | None | None | None | None | N |
Q/D | 0.2516 | likely_benign | 0.2521 | benign | 0.029 | Stabilizing | 0.003 | N | 0.111 | neutral | None | None | None | None | N |
Q/E | 0.0681 | likely_benign | 0.0706 | benign | -0.022 | Destabilizing | 0.002 | N | 0.117 | neutral | N | 0.342477643 | None | None | N |
Q/F | 0.74 | likely_pathogenic | 0.7225 | pathogenic | -0.503 | Destabilizing | 0.981 | D | 0.219 | neutral | None | None | None | None | N |
Q/G | 0.1985 | likely_benign | 0.1886 | benign | -0.272 | Destabilizing | 0.001 | N | 0.084 | neutral | None | None | None | None | N |
Q/H | 0.2074 | likely_benign | 0.2159 | benign | -0.179 | Destabilizing | 0.927 | D | 0.213 | neutral | N | 0.444048875 | None | None | N |
Q/I | 0.4639 | ambiguous | 0.4548 | ambiguous | 0.108 | Stabilizing | 0.944 | D | 0.271 | neutral | None | None | None | None | N |
Q/K | 0.0823 | likely_benign | 0.0863 | benign | 0.135 | Stabilizing | 0.01 | N | 0.081 | neutral | N | 0.381000381 | None | None | N |
Q/L | 0.1487 | likely_benign | 0.1441 | benign | 0.108 | Stabilizing | 0.642 | D | 0.269 | neutral | N | 0.435714317 | None | None | N |
Q/M | 0.4076 | ambiguous | 0.3802 | ambiguous | 0.315 | Stabilizing | 0.981 | D | 0.245 | neutral | None | None | None | None | N |
Q/N | 0.2269 | likely_benign | 0.2292 | benign | -0.137 | Destabilizing | 0.329 | N | 0.115 | neutral | None | None | None | None | N |
Q/P | 0.1584 | likely_benign | 0.1517 | benign | 0.05 | Stabilizing | 0.784 | D | 0.307 | neutral | N | 0.450447973 | None | None | N |
Q/R | 0.1126 | likely_benign | 0.1121 | benign | 0.281 | Stabilizing | 0.27 | N | 0.129 | neutral | N | 0.435425746 | None | None | N |
Q/S | 0.1971 | likely_benign | 0.1772 | benign | -0.13 | Destabilizing | 0.495 | N | 0.152 | neutral | None | None | None | None | N |
Q/T | 0.1952 | likely_benign | 0.1782 | benign | -0.042 | Destabilizing | 0.704 | D | 0.231 | neutral | None | None | None | None | N |
Q/V | 0.3141 | likely_benign | 0.2982 | benign | 0.05 | Stabilizing | 0.828 | D | 0.273 | neutral | None | None | None | None | N |
Q/W | 0.5787 | likely_pathogenic | 0.6002 | pathogenic | -0.538 | Destabilizing | 0.995 | D | 0.206 | neutral | None | None | None | None | N |
Q/Y | 0.5161 | ambiguous | 0.516 | ambiguous | -0.254 | Destabilizing | 0.981 | D | 0.221 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.