Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15191 | 45796;45797;45798 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
N2AB | 13550 | 40873;40874;40875 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
N2A | 12623 | 38092;38093;38094 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
N2B | 6126 | 18601;18602;18603 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
Novex-1 | 6251 | 18976;18977;18978 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
Novex-2 | 6318 | 19177;19178;19179 | chr2:178621147;178621146;178621145 | chr2:179485874;179485873;179485872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.64 | N | 0.666 | 0.129 | 0.543691374674 | gnomAD-4.0.0 | 1.59369E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02828E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3971 | ambiguous | 0.4435 | ambiguous | -2.161 | Highly Destabilizing | 0.026 | N | 0.414 | neutral | N | 0.45438068 | None | None | N |
V/C | 0.8838 | likely_pathogenic | 0.8922 | pathogenic | -1.471 | Destabilizing | 0.997 | D | 0.764 | deleterious | None | None | None | None | N |
V/D | 0.9951 | likely_pathogenic | 0.9963 | pathogenic | -3.185 | Highly Destabilizing | 0.984 | D | 0.887 | deleterious | D | 0.584753116 | None | None | N |
V/E | 0.9872 | likely_pathogenic | 0.9892 | pathogenic | -2.904 | Highly Destabilizing | 0.976 | D | 0.863 | deleterious | None | None | None | None | N |
V/F | 0.8152 | likely_pathogenic | 0.8683 | pathogenic | -1.233 | Destabilizing | 0.059 | N | 0.585 | neutral | N | 0.48428284 | None | None | N |
V/G | 0.7482 | likely_pathogenic | 0.7847 | pathogenic | -2.725 | Highly Destabilizing | 0.811 | D | 0.864 | deleterious | D | 0.584593243 | None | None | N |
V/H | 0.9967 | likely_pathogenic | 0.9977 | pathogenic | -2.596 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/I | 0.1509 | likely_benign | 0.1712 | benign | -0.535 | Destabilizing | 0.78 | D | 0.594 | neutral | N | 0.442537305 | None | None | N |
V/K | 0.9946 | likely_pathogenic | 0.9955 | pathogenic | -1.763 | Destabilizing | 0.976 | D | 0.865 | deleterious | None | None | None | None | N |
V/L | 0.5488 | ambiguous | 0.5768 | pathogenic | -0.535 | Destabilizing | 0.64 | D | 0.666 | neutral | N | 0.436586961 | None | None | N |
V/M | 0.5946 | likely_pathogenic | 0.6548 | pathogenic | -0.594 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
V/N | 0.9799 | likely_pathogenic | 0.9847 | pathogenic | -2.31 | Highly Destabilizing | 0.988 | D | 0.891 | deleterious | None | None | None | None | N |
V/P | 0.9897 | likely_pathogenic | 0.9917 | pathogenic | -1.058 | Destabilizing | 0.988 | D | 0.872 | deleterious | None | None | None | None | N |
V/Q | 0.9853 | likely_pathogenic | 0.9884 | pathogenic | -2.049 | Highly Destabilizing | 0.988 | D | 0.879 | deleterious | None | None | None | None | N |
V/R | 0.9885 | likely_pathogenic | 0.9903 | pathogenic | -1.755 | Destabilizing | 0.988 | D | 0.887 | deleterious | None | None | None | None | N |
V/S | 0.8477 | likely_pathogenic | 0.8773 | pathogenic | -2.817 | Highly Destabilizing | 0.851 | D | 0.851 | deleterious | None | None | None | None | N |
V/T | 0.7214 | likely_pathogenic | 0.754 | pathogenic | -2.395 | Highly Destabilizing | 0.919 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9992 | pathogenic | -1.864 | Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
V/Y | 0.9889 | likely_pathogenic | 0.9926 | pathogenic | -1.477 | Destabilizing | 0.952 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.