Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15204 | 45835;45836;45837 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
N2AB | 13563 | 40912;40913;40914 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
N2A | 12636 | 38131;38132;38133 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
N2B | 6139 | 18640;18641;18642 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
Novex-1 | 6264 | 19015;19016;19017 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
Novex-2 | 6331 | 19216;19217;19218 | chr2:178621108;178621107;178621106 | chr2:179485835;179485834;179485833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs1337863742 | -2.346 | 0.998 | D | 0.711 | 0.826 | 0.876902895405 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.96E-06 | 0 |
V/D | rs1337863742 | -2.346 | 0.998 | D | 0.711 | 0.826 | 0.876902895405 | gnomAD-4.0.0 | 1.59547E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86261E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8996 | likely_pathogenic | 0.8834 | pathogenic | -2.185 | Highly Destabilizing | 0.973 | D | 0.491 | neutral | D | 0.76816884 | None | None | N |
V/C | 0.9878 | likely_pathogenic | 0.98 | pathogenic | -1.804 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
V/D | 0.9968 | likely_pathogenic | 0.9976 | pathogenic | -2.798 | Highly Destabilizing | 0.998 | D | 0.711 | prob.delet. | D | 0.770357693 | None | None | N |
V/E | 0.9905 | likely_pathogenic | 0.9933 | pathogenic | -2.669 | Highly Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
V/F | 0.9173 | likely_pathogenic | 0.9156 | pathogenic | -1.37 | Destabilizing | 0.999 | D | 0.585 | neutral | D | 0.76967584 | None | None | N |
V/G | 0.944 | likely_pathogenic | 0.949 | pathogenic | -2.616 | Highly Destabilizing | 0.217 | N | 0.46 | neutral | D | 0.770357693 | None | None | N |
V/H | 0.998 | likely_pathogenic | 0.9982 | pathogenic | -2.116 | Highly Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/I | 0.1241 | likely_benign | 0.1165 | benign | -1.014 | Destabilizing | 0.998 | D | 0.501 | neutral | D | 0.59371682 | None | None | N |
V/K | 0.992 | likely_pathogenic | 0.9939 | pathogenic | -1.786 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/L | 0.6904 | likely_pathogenic | 0.6698 | pathogenic | -1.014 | Destabilizing | 0.996 | D | 0.509 | neutral | D | 0.730589096 | None | None | N |
V/M | 0.7633 | likely_pathogenic | 0.7644 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
V/N | 0.9877 | likely_pathogenic | 0.9879 | pathogenic | -1.929 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/P | 0.9875 | likely_pathogenic | 0.9832 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
V/Q | 0.9921 | likely_pathogenic | 0.9936 | pathogenic | -1.948 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/R | 0.9881 | likely_pathogenic | 0.9906 | pathogenic | -1.387 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/S | 0.972 | likely_pathogenic | 0.9708 | pathogenic | -2.492 | Highly Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | N |
V/T | 0.919 | likely_pathogenic | 0.9157 | pathogenic | -2.249 | Highly Destabilizing | 0.996 | D | 0.563 | neutral | None | None | None | None | N |
V/W | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -1.743 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/Y | 0.9956 | likely_pathogenic | 0.9953 | pathogenic | -1.461 | Destabilizing | 1.0 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.