Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15209 | 45850;45851;45852 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
N2AB | 13568 | 40927;40928;40929 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
N2A | 12641 | 38146;38147;38148 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
N2B | 6144 | 18655;18656;18657 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
Novex-1 | 6269 | 19030;19031;19032 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
Novex-2 | 6336 | 19231;19232;19233 | chr2:178620985;178620984;178620983 | chr2:179485712;179485711;179485710 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | None | None | 0.09 | N | 0.31 | 0.138 | 0.151104730317 | gnomAD-4.0.0 | 6.85951E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00367E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5161 | ambiguous | 0.4872 | ambiguous | -0.267 | Destabilizing | 0.116 | N | 0.3 | neutral | None | None | None | None | N |
R/C | 0.2946 | likely_benign | 0.2637 | benign | -0.445 | Destabilizing | 0.981 | D | 0.346 | neutral | None | None | None | None | N |
R/D | 0.7403 | likely_pathogenic | 0.7352 | pathogenic | -0.025 | Destabilizing | 0.388 | N | 0.334 | neutral | None | None | None | None | N |
R/E | 0.375 | ambiguous | 0.3794 | ambiguous | 0.094 | Stabilizing | 0.116 | N | 0.281 | neutral | None | None | None | None | N |
R/F | 0.7209 | likely_pathogenic | 0.6817 | pathogenic | -0.187 | Destabilizing | 0.818 | D | 0.351 | neutral | None | None | None | None | N |
R/G | 0.3823 | ambiguous | 0.3465 | ambiguous | -0.548 | Destabilizing | 0.324 | N | 0.335 | neutral | N | 0.489531362 | None | None | N |
R/H | 0.1203 | likely_benign | 0.1234 | benign | -0.95 | Destabilizing | 0.818 | D | 0.352 | neutral | None | None | None | None | N |
R/I | 0.3861 | ambiguous | 0.3442 | ambiguous | 0.468 | Stabilizing | 0.527 | D | 0.383 | neutral | None | None | None | None | N |
R/K | 0.0923 | likely_benign | 0.0859 | benign | -0.362 | Destabilizing | None | N | 0.133 | neutral | N | 0.433536328 | None | None | N |
R/L | 0.3937 | ambiguous | 0.3613 | ambiguous | 0.468 | Stabilizing | 0.241 | N | 0.34 | neutral | None | None | None | None | N |
R/M | 0.3772 | ambiguous | 0.3254 | benign | -0.1 | Destabilizing | 0.773 | D | 0.33 | neutral | N | 0.441558255 | None | None | N |
R/N | 0.5619 | ambiguous | 0.5583 | ambiguous | -0.145 | Destabilizing | 0.388 | N | 0.275 | neutral | None | None | None | None | N |
R/P | 0.9489 | likely_pathogenic | 0.9354 | pathogenic | 0.245 | Stabilizing | 0.818 | D | 0.357 | neutral | None | None | None | None | N |
R/Q | 0.1088 | likely_benign | 0.1107 | benign | -0.181 | Destabilizing | 0.241 | N | 0.341 | neutral | None | None | None | None | N |
R/S | 0.5076 | ambiguous | 0.4901 | ambiguous | -0.646 | Destabilizing | 0.09 | N | 0.31 | neutral | N | 0.444960939 | None | None | N |
R/T | 0.285 | likely_benign | 0.2656 | benign | -0.353 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.447361167 | None | None | N |
R/V | 0.4439 | ambiguous | 0.4349 | ambiguous | 0.245 | Stabilizing | 0.241 | N | 0.361 | neutral | None | None | None | None | N |
R/W | 0.3211 | likely_benign | 0.269 | benign | -0.06 | Destabilizing | 0.975 | D | 0.395 | neutral | N | 0.489531362 | None | None | N |
R/Y | 0.5766 | likely_pathogenic | 0.5477 | ambiguous | 0.287 | Stabilizing | 0.932 | D | 0.356 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.