Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1521 | 4786;4787;4788 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
N2AB | 1521 | 4786;4787;4788 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
N2A | 1521 | 4786;4787;4788 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
N2B | 1475 | 4648;4649;4650 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
Novex-1 | 1475 | 4648;4649;4650 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
Novex-2 | 1475 | 4648;4649;4650 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
Novex-3 | 1521 | 4786;4787;4788 | chr2:178777504;178777503;178777502 | chr2:179642231;179642230;179642229 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.012 | D | 0.402 | 0.109 | 0.29132392195 | gnomAD-4.0.0 | 2.40067E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62503E-06 | 0 | 0 |
T/P | rs1574674545 | None | 0.055 | D | 0.434 | 0.219 | 0.0806252709748 | gnomAD-4.0.0 | 1.59124E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0676 | likely_benign | 0.0684 | benign | -0.727 | Destabilizing | None | N | 0.103 | neutral | N | 0.508355694 | None | None | I |
T/C | 0.3435 | ambiguous | 0.3173 | benign | -0.466 | Destabilizing | 0.356 | N | 0.398 | neutral | None | None | None | None | I |
T/D | 0.2619 | likely_benign | 0.2486 | benign | -0.322 | Destabilizing | 0.038 | N | 0.436 | neutral | None | None | None | None | I |
T/E | 0.1967 | likely_benign | 0.188 | benign | -0.353 | Destabilizing | 0.016 | N | 0.427 | neutral | None | None | None | None | I |
T/F | 0.1668 | likely_benign | 0.1539 | benign | -0.982 | Destabilizing | 0.072 | N | 0.524 | neutral | None | None | None | None | I |
T/G | 0.1561 | likely_benign | 0.1499 | benign | -0.94 | Destabilizing | 0.016 | N | 0.361 | neutral | None | None | None | None | I |
T/H | 0.195 | likely_benign | 0.1741 | benign | -1.295 | Destabilizing | 0.214 | N | 0.455 | neutral | None | None | None | None | I |
T/I | 0.0978 | likely_benign | 0.0971 | benign | -0.26 | Destabilizing | 0.012 | N | 0.402 | neutral | D | 0.537603329 | None | None | I |
T/K | 0.1179 | likely_benign | 0.1075 | benign | -0.685 | Destabilizing | 0.012 | N | 0.406 | neutral | N | 0.498872838 | None | None | I |
T/L | 0.0639 | likely_benign | 0.062 | benign | -0.26 | Destabilizing | None | N | 0.102 | neutral | None | None | None | None | I |
T/M | 0.066 | likely_benign | 0.067 | benign | 0.133 | Stabilizing | 0.001 | N | 0.103 | neutral | None | None | None | None | I |
T/N | 0.0914 | likely_benign | 0.0907 | benign | -0.586 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | I |
T/P | 0.3583 | ambiguous | 0.424 | ambiguous | -0.385 | Destabilizing | 0.055 | N | 0.434 | neutral | D | 0.659602375 | None | None | I |
T/Q | 0.1491 | likely_benign | 0.1391 | benign | -0.842 | Destabilizing | 0.072 | N | 0.472 | neutral | None | None | None | None | I |
T/R | 0.1147 | likely_benign | 0.1056 | benign | -0.393 | Destabilizing | 0.055 | N | 0.437 | neutral | N | 0.452945221 | None | None | I |
T/S | 0.0805 | likely_benign | 0.0782 | benign | -0.833 | Destabilizing | None | N | 0.152 | neutral | N | 0.498798882 | None | None | I |
T/V | 0.0822 | likely_benign | 0.0803 | benign | -0.385 | Destabilizing | None | N | 0.132 | neutral | None | None | None | None | I |
T/W | 0.5144 | ambiguous | 0.4946 | ambiguous | -0.907 | Destabilizing | 0.864 | D | 0.439 | neutral | None | None | None | None | I |
T/Y | 0.2368 | likely_benign | 0.2214 | benign | -0.662 | Destabilizing | 0.356 | N | 0.519 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.