Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15214 | 45865;45866;45867 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
N2AB | 13573 | 40942;40943;40944 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
N2A | 12646 | 38161;38162;38163 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
N2B | 6149 | 18670;18671;18672 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
Novex-1 | 6274 | 19045;19046;19047 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
Novex-2 | 6341 | 19246;19247;19248 | chr2:178620970;178620969;178620968 | chr2:179485697;179485696;179485695 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs2154211474 | None | 0.997 | N | 0.857 | 0.473 | 0.720053583897 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 1.94628E-04 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs2154211474 | None | 0.997 | N | 0.857 | 0.473 | 0.720053583897 | gnomAD-4.0.0 | 6.57843E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.95084E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8479 | likely_pathogenic | 0.8804 | pathogenic | -2.21 | Highly Destabilizing | 0.91 | D | 0.545 | neutral | None | None | None | None | I |
L/C | 0.9191 | likely_pathogenic | 0.9237 | pathogenic | -1.394 | Destabilizing | 0.999 | D | 0.778 | deleterious | None | None | None | None | I |
L/D | 0.9984 | likely_pathogenic | 0.9987 | pathogenic | -2.06 | Highly Destabilizing | 0.998 | D | 0.856 | deleterious | None | None | None | None | I |
L/E | 0.986 | likely_pathogenic | 0.9884 | pathogenic | -1.939 | Destabilizing | 0.993 | D | 0.843 | deleterious | None | None | None | None | I |
L/F | 0.7654 | likely_pathogenic | 0.7889 | pathogenic | -1.359 | Destabilizing | 0.991 | D | 0.693 | prob.neutral | D | 0.613914355 | None | None | I |
L/G | 0.9827 | likely_pathogenic | 0.9862 | pathogenic | -2.668 | Highly Destabilizing | 0.993 | D | 0.839 | deleterious | None | None | None | None | I |
L/H | 0.9838 | likely_pathogenic | 0.9858 | pathogenic | -1.988 | Destabilizing | 0.999 | D | 0.85 | deleterious | D | 0.617217434 | None | None | I |
L/I | 0.1617 | likely_benign | 0.1749 | benign | -0.946 | Destabilizing | 0.17 | N | 0.337 | neutral | N | 0.457821693 | None | None | I |
L/K | 0.984 | likely_pathogenic | 0.9852 | pathogenic | -1.628 | Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | I |
L/M | 0.3207 | likely_benign | 0.3478 | ambiguous | -0.761 | Destabilizing | 0.993 | D | 0.709 | prob.delet. | None | None | None | None | I |
L/N | 0.9875 | likely_pathogenic | 0.9904 | pathogenic | -1.657 | Destabilizing | 0.998 | D | 0.865 | deleterious | None | None | None | None | I |
L/P | 0.7122 | likely_pathogenic | 0.8226 | pathogenic | -1.342 | Destabilizing | 0.997 | D | 0.857 | deleterious | N | 0.467819822 | None | None | I |
L/Q | 0.9468 | likely_pathogenic | 0.9553 | pathogenic | -1.686 | Destabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | I |
L/R | 0.9707 | likely_pathogenic | 0.9735 | pathogenic | -1.164 | Destabilizing | 0.997 | D | 0.82 | deleterious | D | 0.614641559 | None | None | I |
L/S | 0.9722 | likely_pathogenic | 0.9775 | pathogenic | -2.345 | Highly Destabilizing | 0.993 | D | 0.799 | deleterious | None | None | None | None | I |
L/T | 0.8933 | likely_pathogenic | 0.9149 | pathogenic | -2.094 | Highly Destabilizing | 0.986 | D | 0.723 | prob.delet. | None | None | None | None | I |
L/V | 0.1991 | likely_benign | 0.2205 | benign | -1.342 | Destabilizing | 0.046 | N | 0.327 | neutral | N | 0.508711268 | None | None | I |
L/W | 0.9745 | likely_pathogenic | 0.9767 | pathogenic | -1.621 | Destabilizing | 0.999 | D | 0.788 | deleterious | None | None | None | None | I |
L/Y | 0.9898 | likely_pathogenic | 0.9903 | pathogenic | -1.359 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.