Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15217 | 45874;45875;45876 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
N2AB | 13576 | 40951;40952;40953 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
N2A | 12649 | 38170;38171;38172 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
N2B | 6152 | 18679;18680;18681 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
Novex-1 | 6277 | 19054;19055;19056 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
Novex-2 | 6344 | 19255;19256;19257 | chr2:178620961;178620960;178620959 | chr2:179485688;179485687;179485686 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.896 | N | 0.375 | 0.188 | 0.422160833541 | gnomAD-4.0.0 | 3.18912E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.72574E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0906 | likely_benign | 0.0955 | benign | -0.716 | Destabilizing | 0.201 | N | 0.377 | neutral | N | 0.506553931 | None | None | N |
T/C | 0.4172 | ambiguous | 0.4218 | ambiguous | -0.468 | Destabilizing | 0.992 | D | 0.375 | neutral | None | None | None | None | N |
T/D | 0.4775 | ambiguous | 0.4508 | ambiguous | 0.097 | Stabilizing | 0.617 | D | 0.355 | neutral | None | None | None | None | N |
T/E | 0.2763 | likely_benign | 0.2627 | benign | 0.155 | Stabilizing | 0.25 | N | 0.395 | neutral | None | None | None | None | N |
T/F | 0.251 | likely_benign | 0.2598 | benign | -0.663 | Destabilizing | 0.972 | D | 0.445 | neutral | None | None | None | None | N |
T/G | 0.3335 | likely_benign | 0.3297 | benign | -1.022 | Destabilizing | 0.617 | D | 0.411 | neutral | None | None | None | None | N |
T/H | 0.2578 | likely_benign | 0.2659 | benign | -1.188 | Destabilizing | 0.92 | D | 0.435 | neutral | None | None | None | None | N |
T/I | 0.1126 | likely_benign | 0.1314 | benign | 0.021 | Stabilizing | 0.896 | D | 0.375 | neutral | N | 0.494716585 | None | None | N |
T/K | 0.1457 | likely_benign | 0.14 | benign | -0.496 | Destabilizing | 0.005 | N | 0.226 | neutral | None | None | None | None | N |
T/L | 0.0958 | likely_benign | 0.1068 | benign | 0.021 | Stabilizing | 0.617 | D | 0.379 | neutral | None | None | None | None | N |
T/M | 0.0829 | likely_benign | 0.0907 | benign | 0.002 | Stabilizing | 0.92 | D | 0.377 | neutral | None | None | None | None | N |
T/N | 0.1511 | likely_benign | 0.1563 | benign | -0.592 | Destabilizing | 0.549 | D | 0.345 | neutral | D | 0.571767091 | None | None | N |
T/P | 0.5362 | ambiguous | 0.5247 | ambiguous | -0.191 | Destabilizing | 0.896 | D | 0.363 | neutral | D | 0.571919121 | None | None | N |
T/Q | 0.1716 | likely_benign | 0.1705 | benign | -0.576 | Destabilizing | 0.021 | N | 0.195 | neutral | None | None | None | None | N |
T/R | 0.1268 | likely_benign | 0.1216 | benign | -0.443 | Destabilizing | 0.447 | N | 0.349 | neutral | None | None | None | None | N |
T/S | 0.142 | likely_benign | 0.1478 | benign | -0.911 | Destabilizing | 0.201 | N | 0.425 | neutral | D | 0.527399943 | None | None | N |
T/V | 0.1143 | likely_benign | 0.1302 | benign | -0.191 | Destabilizing | 0.617 | D | 0.337 | neutral | None | None | None | None | N |
T/W | 0.599 | likely_pathogenic | 0.5866 | pathogenic | -0.67 | Destabilizing | 0.992 | D | 0.487 | neutral | None | None | None | None | N |
T/Y | 0.2883 | likely_benign | 0.2886 | benign | -0.383 | Destabilizing | 0.972 | D | 0.441 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.