Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15222 | 45889;45890;45891 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
N2AB | 13581 | 40966;40967;40968 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
N2A | 12654 | 38185;38186;38187 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
N2B | 6157 | 18694;18695;18696 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
Novex-1 | 6282 | 19069;19070;19071 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
Novex-2 | 6349 | 19270;19271;19272 | chr2:178620946;178620945;178620944 | chr2:179485673;179485672;179485671 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs2058168500 | None | 0.101 | N | 0.365 | 0.17 | 0.148003135375 | gnomAD-4.0.0 | 8.21724E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07987E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2344 | likely_benign | 0.2489 | benign | -0.283 | Destabilizing | 0.027 | N | 0.328 | neutral | None | None | None | None | N |
Q/C | 0.5964 | likely_pathogenic | 0.6163 | pathogenic | 0.354 | Stabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | N |
Q/D | 0.2943 | likely_benign | 0.3142 | benign | -0.198 | Destabilizing | 0.129 | N | 0.353 | neutral | None | None | None | None | N |
Q/E | 0.1023 | likely_benign | 0.0985 | benign | -0.212 | Destabilizing | 0.001 | N | 0.177 | neutral | N | 0.424272929 | None | None | N |
Q/F | 0.6472 | likely_pathogenic | 0.6767 | pathogenic | -0.344 | Destabilizing | 0.94 | D | 0.477 | neutral | None | None | None | None | N |
Q/G | 0.1261 | likely_benign | 0.1243 | benign | -0.511 | Destabilizing | None | N | 0.217 | neutral | None | None | None | None | N |
Q/H | 0.2142 | likely_benign | 0.2378 | benign | -0.435 | Destabilizing | 0.794 | D | 0.374 | neutral | N | 0.443142171 | None | None | N |
Q/I | 0.5733 | likely_pathogenic | 0.5854 | pathogenic | 0.245 | Stabilizing | 0.418 | N | 0.492 | neutral | None | None | None | None | N |
Q/K | 0.0812 | likely_benign | 0.0836 | benign | -0.118 | Destabilizing | 0.101 | N | 0.365 | neutral | N | 0.394963905 | None | None | N |
Q/L | 0.1664 | likely_benign | 0.1692 | benign | 0.245 | Stabilizing | 0.101 | N | 0.407 | neutral | N | 0.478735164 | None | None | N |
Q/M | 0.3853 | ambiguous | 0.3972 | ambiguous | 0.564 | Stabilizing | 0.94 | D | 0.378 | neutral | None | None | None | None | N |
Q/N | 0.1826 | likely_benign | 0.2046 | benign | -0.217 | Destabilizing | 0.228 | N | 0.323 | neutral | None | None | None | None | N |
Q/P | 0.3942 | ambiguous | 0.3914 | ambiguous | 0.098 | Stabilizing | 0.523 | D | 0.453 | neutral | N | 0.478735164 | None | None | N |
Q/R | 0.1005 | likely_benign | 0.0981 | benign | 0.068 | Stabilizing | 0.351 | N | 0.331 | neutral | N | 0.425351105 | None | None | N |
Q/S | 0.221 | likely_benign | 0.2458 | benign | -0.256 | Destabilizing | 0.061 | N | 0.333 | neutral | None | None | None | None | N |
Q/T | 0.24 | likely_benign | 0.2642 | benign | -0.125 | Destabilizing | 0.228 | N | 0.408 | neutral | None | None | None | None | N |
Q/V | 0.4366 | ambiguous | 0.4469 | ambiguous | 0.098 | Stabilizing | 0.228 | N | 0.411 | neutral | None | None | None | None | N |
Q/W | 0.5715 | likely_pathogenic | 0.5292 | ambiguous | -0.326 | Destabilizing | 0.983 | D | 0.454 | neutral | None | None | None | None | N |
Q/Y | 0.4148 | ambiguous | 0.4277 | ambiguous | -0.108 | Destabilizing | 0.94 | D | 0.462 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.