Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15224 | 45895;45896;45897 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
N2AB | 13583 | 40972;40973;40974 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
N2A | 12656 | 38191;38192;38193 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
N2B | 6159 | 18700;18701;18702 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
Novex-1 | 6284 | 19075;19076;19077 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
Novex-2 | 6351 | 19276;19277;19278 | chr2:178620940;178620939;178620938 | chr2:179485667;179485666;179485665 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.999 | N | 0.584 | 0.38 | 0.223146558224 | gnomAD-4.0.0 | 1.36951E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3055 | likely_benign | 0.3332 | benign | -0.508 | Destabilizing | 0.999 | D | 0.655 | neutral | N | 0.44992847 | None | None | N |
E/C | 0.9728 | likely_pathogenic | 0.9692 | pathogenic | -0.361 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
E/D | 0.2489 | likely_benign | 0.2716 | benign | -0.741 | Destabilizing | 0.999 | D | 0.451 | neutral | N | 0.446953134 | None | None | N |
E/F | 0.9497 | likely_pathogenic | 0.9524 | pathogenic | 0.017 | Stabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/G | 0.3975 | ambiguous | 0.4195 | ambiguous | -0.819 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.431060149 | None | None | N |
E/H | 0.8698 | likely_pathogenic | 0.8725 | pathogenic | None | Stabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
E/I | 0.743 | likely_pathogenic | 0.7641 | pathogenic | 0.319 | Stabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
E/K | 0.5696 | likely_pathogenic | 0.5894 | pathogenic | -0.199 | Destabilizing | 0.999 | D | 0.584 | neutral | N | 0.448258581 | None | None | N |
E/L | 0.7987 | likely_pathogenic | 0.8048 | pathogenic | 0.319 | Stabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
E/M | 0.7871 | likely_pathogenic | 0.8015 | pathogenic | 0.434 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/N | 0.5694 | likely_pathogenic | 0.5813 | pathogenic | -0.701 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/P | 0.7377 | likely_pathogenic | 0.723 | pathogenic | 0.065 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
E/Q | 0.4244 | ambiguous | 0.4365 | ambiguous | -0.58 | Destabilizing | 1.0 | D | 0.599 | neutral | N | 0.452767565 | None | None | N |
E/R | 0.729 | likely_pathogenic | 0.7306 | pathogenic | 0.134 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/S | 0.4639 | ambiguous | 0.4904 | ambiguous | -0.911 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | N |
E/T | 0.494 | ambiguous | 0.5335 | ambiguous | -0.655 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
E/V | 0.4887 | ambiguous | 0.5238 | ambiguous | 0.065 | Stabilizing | 1.0 | D | 0.745 | deleterious | N | 0.453628123 | None | None | N |
E/W | 0.9806 | likely_pathogenic | 0.9806 | pathogenic | 0.246 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/Y | 0.9049 | likely_pathogenic | 0.9051 | pathogenic | 0.263 | Stabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.