Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15228 | 45907;45908;45909 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
N2AB | 13587 | 40984;40985;40986 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
N2A | 12660 | 38203;38204;38205 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
N2B | 6163 | 18712;18713;18714 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
Novex-1 | 6288 | 19087;19088;19089 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
Novex-2 | 6355 | 19288;19289;19290 | chr2:178620928;178620927;178620926 | chr2:179485655;179485654;179485653 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/I | None | None | 0.971 | N | 0.702 | 0.516 | 0.772084405115 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86257E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3516 | ambiguous | 0.3729 | ambiguous | -0.838 | Destabilizing | 0.754 | D | 0.573 | neutral | None | None | None | None | I |
N/C | 0.4118 | ambiguous | 0.3934 | ambiguous | 0.057 | Stabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | I |
N/D | 0.2501 | likely_benign | 0.2765 | benign | -0.28 | Destabilizing | 0.822 | D | 0.495 | neutral | N | 0.502732099 | None | None | I |
N/E | 0.5462 | ambiguous | 0.5708 | pathogenic | -0.166 | Destabilizing | 0.86 | D | 0.491 | neutral | None | None | None | None | I |
N/F | 0.6507 | likely_pathogenic | 0.6285 | pathogenic | -0.53 | Destabilizing | 0.956 | D | 0.705 | prob.neutral | None | None | None | None | I |
N/G | 0.5004 | ambiguous | 0.5196 | ambiguous | -1.197 | Destabilizing | 0.754 | D | 0.502 | neutral | None | None | None | None | I |
N/H | 0.1033 | likely_benign | 0.0962 | benign | -0.873 | Destabilizing | 0.032 | N | 0.341 | neutral | N | 0.514826976 | None | None | I |
N/I | 0.2341 | likely_benign | 0.2468 | benign | 0.082 | Stabilizing | 0.971 | D | 0.702 | prob.neutral | N | 0.515612042 | None | None | I |
N/K | 0.4492 | ambiguous | 0.463 | ambiguous | -0.142 | Destabilizing | 0.698 | D | 0.51 | neutral | N | 0.506871151 | None | None | I |
N/L | 0.3004 | likely_benign | 0.2866 | benign | 0.082 | Stabilizing | 0.956 | D | 0.661 | neutral | None | None | None | None | I |
N/M | 0.4707 | ambiguous | 0.4901 | ambiguous | 0.436 | Stabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | I |
N/P | 0.8497 | likely_pathogenic | 0.841 | pathogenic | -0.194 | Destabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | I |
N/Q | 0.42 | ambiguous | 0.4328 | ambiguous | -0.667 | Destabilizing | 0.956 | D | 0.561 | neutral | None | None | None | None | I |
N/R | 0.4287 | ambiguous | 0.4227 | ambiguous | -0.242 | Destabilizing | 0.956 | D | 0.539 | neutral | None | None | None | None | I |
N/S | 0.0858 | likely_benign | 0.0937 | benign | -0.821 | Destabilizing | 0.058 | N | 0.368 | neutral | N | 0.495394783 | None | None | I |
N/T | 0.1451 | likely_benign | 0.1499 | benign | -0.502 | Destabilizing | 0.698 | D | 0.493 | neutral | N | 0.500244014 | None | None | I |
N/V | 0.2841 | likely_benign | 0.2941 | benign | -0.194 | Destabilizing | 0.956 | D | 0.698 | prob.neutral | None | None | None | None | I |
N/W | 0.878 | likely_pathogenic | 0.8639 | pathogenic | -0.284 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | I |
N/Y | 0.2329 | likely_benign | 0.2244 | benign | -0.071 | Destabilizing | 0.89 | D | 0.689 | prob.neutral | N | 0.510880949 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.