Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15230 | 45913;45914;45915 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
N2AB | 13589 | 40990;40991;40992 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
N2A | 12662 | 38209;38210;38211 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
N2B | 6165 | 18718;18719;18720 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
Novex-1 | 6290 | 19093;19094;19095 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
Novex-2 | 6357 | 19294;19295;19296 | chr2:178620922;178620921;178620920 | chr2:179485649;179485648;179485647 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1209787066 | -1.61 | 1.0 | D | 0.747 | 0.603 | 0.607256217586 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.91E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1209787066 | -1.61 | 1.0 | D | 0.747 | 0.603 | 0.607256217586 | gnomAD-4.0.0 | 3.1879E-06 | None | None | None | None | N | None | 0 | 2.29263E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03122E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3633 | ambiguous | 0.3354 | benign | -0.979 | Destabilizing | 0.999 | D | 0.663 | neutral | D | 0.611650359 | None | None | N |
E/C | 0.9761 | likely_pathogenic | 0.9615 | pathogenic | -0.608 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
E/D | 0.6443 | likely_pathogenic | 0.6577 | pathogenic | -1.341 | Destabilizing | 0.999 | D | 0.463 | neutral | D | 0.673812746 | None | None | N |
E/F | 0.9513 | likely_pathogenic | 0.9364 | pathogenic | -0.467 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
E/G | 0.6514 | likely_pathogenic | 0.5762 | pathogenic | -1.38 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.676006104 | None | None | N |
E/H | 0.8244 | likely_pathogenic | 0.8044 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.72 | prob.delet. | None | None | None | None | N |
E/I | 0.6478 | likely_pathogenic | 0.594 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
E/K | 0.3122 | likely_benign | 0.2717 | benign | -1.03 | Destabilizing | 0.999 | D | 0.551 | neutral | N | 0.503218333 | None | None | N |
E/L | 0.7793 | likely_pathogenic | 0.7398 | pathogenic | 0.139 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
E/M | 0.7282 | likely_pathogenic | 0.6834 | pathogenic | 0.652 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
E/N | 0.7527 | likely_pathogenic | 0.7393 | pathogenic | -1.411 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/P | 0.9891 | likely_pathogenic | 0.9855 | pathogenic | -0.213 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
E/Q | 0.246 | likely_benign | 0.2371 | benign | -1.223 | Destabilizing | 1.0 | D | 0.615 | neutral | D | 0.592435225 | None | None | N |
E/R | 0.5178 | ambiguous | 0.4519 | ambiguous | -0.791 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/S | 0.5308 | ambiguous | 0.5137 | ambiguous | -1.862 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
E/T | 0.4854 | ambiguous | 0.4536 | ambiguous | -1.521 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
E/V | 0.4293 | ambiguous | 0.3903 | ambiguous | -0.213 | Destabilizing | 1.0 | D | 0.777 | deleterious | D | 0.555001522 | None | None | N |
E/W | 0.9895 | likely_pathogenic | 0.9857 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/Y | 0.9346 | likely_pathogenic | 0.9213 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.