Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15234 | 45925;45926;45927 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
N2AB | 13593 | 41002;41003;41004 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
N2A | 12666 | 38221;38222;38223 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
N2B | 6169 | 18730;18731;18732 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
Novex-1 | 6294 | 19105;19106;19107 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
Novex-2 | 6361 | 19306;19307;19308 | chr2:178620910;178620909;178620908 | chr2:179485637;179485636;179485635 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1457956988 | None | 0.822 | N | 0.623 | 0.353 | 0.396645960531 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94856E-04 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
E/K | rs1457956988 | None | 0.822 | N | 0.623 | 0.353 | 0.396645960531 | gnomAD-4.0.0 | 7.69807E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 9.74991E-05 | None | 0 | 0 | 0 | 1.34081E-05 | 2.849E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2218 | likely_benign | 0.1713 | benign | -0.055 | Destabilizing | 0.822 | D | 0.649 | neutral | N | 0.508628001 | None | None | N |
E/C | 0.9661 | likely_pathogenic | 0.9389 | pathogenic | -0.049 | Destabilizing | 0.998 | D | 0.771 | deleterious | None | None | None | None | N |
E/D | 0.2365 | likely_benign | 0.168 | benign | -0.288 | Destabilizing | 0.006 | N | 0.268 | neutral | N | 0.504722144 | None | None | N |
E/F | 0.9274 | likely_pathogenic | 0.8724 | pathogenic | -0.015 | Destabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
E/G | 0.336 | likely_benign | 0.2341 | benign | -0.203 | Destabilizing | 0.822 | D | 0.63 | neutral | N | 0.512907873 | None | None | N |
E/H | 0.7698 | likely_pathogenic | 0.6772 | pathogenic | 0.474 | Stabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
E/I | 0.6326 | likely_pathogenic | 0.5095 | ambiguous | 0.283 | Stabilizing | 0.978 | D | 0.75 | deleterious | None | None | None | None | N |
E/K | 0.2445 | likely_benign | 0.1971 | benign | 0.553 | Stabilizing | 0.822 | D | 0.623 | neutral | N | 0.509516008 | None | None | N |
E/L | 0.6953 | likely_pathogenic | 0.5573 | ambiguous | 0.283 | Stabilizing | 0.978 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/M | 0.752 | likely_pathogenic | 0.6421 | pathogenic | 0.134 | Stabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
E/N | 0.5312 | ambiguous | 0.3862 | ambiguous | 0.215 | Stabilizing | 0.915 | D | 0.641 | neutral | None | None | None | None | N |
E/P | 0.5823 | likely_pathogenic | 0.4917 | ambiguous | 0.19 | Stabilizing | 0.978 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/Q | 0.2699 | likely_benign | 0.2186 | benign | 0.24 | Stabilizing | 0.942 | D | 0.615 | neutral | D | 0.545860394 | None | None | N |
E/R | 0.4297 | ambiguous | 0.3673 | ambiguous | 0.763 | Stabilizing | 0.978 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/S | 0.3549 | ambiguous | 0.2618 | benign | 0.097 | Stabilizing | 0.86 | D | 0.629 | neutral | None | None | None | None | N |
E/T | 0.4157 | ambiguous | 0.3055 | benign | 0.226 | Stabilizing | 0.956 | D | 0.619 | neutral | None | None | None | None | N |
E/V | 0.3948 | ambiguous | 0.2989 | benign | 0.19 | Stabilizing | 0.971 | D | 0.716 | prob.delet. | N | 0.509043974 | None | None | N |
E/W | 0.9725 | likely_pathogenic | 0.955 | pathogenic | 0.069 | Stabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.8722 | likely_pathogenic | 0.7998 | pathogenic | 0.226 | Stabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.