Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15241 | 45946;45947;45948 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
N2AB | 13600 | 41023;41024;41025 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
N2A | 12673 | 38242;38243;38244 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
N2B | 6176 | 18751;18752;18753 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
Novex-1 | 6301 | 19126;19127;19128 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
Novex-2 | 6368 | 19327;19328;19329 | chr2:178620889;178620888;178620887 | chr2:179485616;179485615;179485614 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.005 | N | 0.216 | 0.171 | 0.26547132957 | gnomAD-4.0.0 | 2.73866E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6996E-06 | 1.1599E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.7301 | likely_pathogenic | 0.7744 | pathogenic | -2.478 | Highly Destabilizing | 0.688 | D | 0.595 | neutral | None | None | None | None | N |
F/C | 0.4339 | ambiguous | 0.524 | ambiguous | -1.297 | Destabilizing | 0.997 | D | 0.61 | neutral | N | 0.501119895 | None | None | N |
F/D | 0.8872 | likely_pathogenic | 0.8849 | pathogenic | -1.596 | Destabilizing | 0.991 | D | 0.649 | neutral | None | None | None | None | N |
F/E | 0.8417 | likely_pathogenic | 0.8399 | pathogenic | -1.505 | Destabilizing | 0.974 | D | 0.645 | neutral | None | None | None | None | N |
F/G | 0.8504 | likely_pathogenic | 0.8626 | pathogenic | -2.817 | Highly Destabilizing | 0.915 | D | 0.627 | neutral | None | None | None | None | N |
F/H | 0.5107 | ambiguous | 0.5511 | ambiguous | -1.069 | Destabilizing | 0.949 | D | 0.593 | neutral | None | None | None | None | N |
F/I | 0.3031 | likely_benign | 0.3636 | ambiguous | -1.439 | Destabilizing | 0.454 | N | 0.547 | neutral | N | 0.44249039 | None | None | N |
F/K | 0.834 | likely_pathogenic | 0.8334 | pathogenic | -1.255 | Destabilizing | 0.974 | D | 0.638 | neutral | None | None | None | None | N |
F/L | 0.7848 | likely_pathogenic | 0.8645 | pathogenic | -1.439 | Destabilizing | 0.005 | N | 0.216 | neutral | N | 0.400064319 | None | None | N |
F/M | 0.5487 | ambiguous | 0.6266 | pathogenic | -1.118 | Destabilizing | 0.325 | N | 0.307 | neutral | None | None | None | None | N |
F/N | 0.6296 | likely_pathogenic | 0.6417 | pathogenic | -1.292 | Destabilizing | 0.974 | D | 0.648 | neutral | None | None | None | None | N |
F/P | 0.9985 | likely_pathogenic | 0.9988 | pathogenic | -1.782 | Destabilizing | 0.991 | D | 0.645 | neutral | None | None | None | None | N |
F/Q | 0.7138 | likely_pathogenic | 0.7334 | pathogenic | -1.451 | Destabilizing | 0.974 | D | 0.646 | neutral | None | None | None | None | N |
F/R | 0.7421 | likely_pathogenic | 0.7419 | pathogenic | -0.521 | Destabilizing | 0.974 | D | 0.651 | neutral | None | None | None | None | N |
F/S | 0.4974 | ambiguous | 0.5442 | ambiguous | -2.089 | Highly Destabilizing | 0.891 | D | 0.601 | neutral | N | 0.457039909 | None | None | N |
F/T | 0.6106 | likely_pathogenic | 0.6399 | pathogenic | -1.908 | Destabilizing | 0.915 | D | 0.607 | neutral | None | None | None | None | N |
F/V | 0.3396 | likely_benign | 0.4012 | ambiguous | -1.782 | Destabilizing | 0.454 | N | 0.545 | neutral | N | 0.495814228 | None | None | N |
F/W | 0.4527 | ambiguous | 0.5126 | ambiguous | -0.502 | Destabilizing | 0.974 | D | 0.571 | neutral | None | None | None | None | N |
F/Y | 0.1356 | likely_benign | 0.145 | benign | -0.711 | Destabilizing | 0.012 | N | 0.207 | neutral | N | 0.404895607 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.