Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15246 | 45961;45962;45963 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
N2AB | 13605 | 41038;41039;41040 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
N2A | 12678 | 38257;38258;38259 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
N2B | 6181 | 18766;18767;18768 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
Novex-1 | 6306 | 19141;19142;19143 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
Novex-2 | 6373 | 19342;19343;19344 | chr2:178620874;178620873;178620872 | chr2:179485601;179485600;179485599 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.309 | N | 0.301 | 0.252 | 0.385743280973 | gnomAD-4.0.0 | 6.84668E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.999E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6938 | likely_pathogenic | 0.7033 | pathogenic | -0.561 | Destabilizing | 0.996 | D | 0.389 | neutral | None | None | None | None | N |
A/D | 0.3321 | likely_benign | 0.3294 | benign | -0.235 | Destabilizing | 0.684 | D | 0.392 | neutral | N | 0.491397408 | None | None | N |
A/E | 0.246 | likely_benign | 0.2468 | benign | -0.292 | Destabilizing | 0.742 | D | 0.371 | neutral | None | None | None | None | N |
A/F | 0.4793 | ambiguous | 0.4994 | ambiguous | -0.632 | Destabilizing | 0.953 | D | 0.455 | neutral | None | None | None | None | N |
A/G | 0.1949 | likely_benign | 0.1919 | benign | -0.589 | Destabilizing | 0.309 | N | 0.301 | neutral | N | 0.513364596 | None | None | N |
A/H | 0.6097 | likely_pathogenic | 0.6174 | pathogenic | -0.52 | Destabilizing | 0.996 | D | 0.431 | neutral | None | None | None | None | N |
A/I | 0.2338 | likely_benign | 0.2898 | benign | -0.106 | Destabilizing | 0.742 | D | 0.384 | neutral | None | None | None | None | N |
A/K | 0.5107 | ambiguous | 0.4897 | ambiguous | -0.623 | Destabilizing | 0.742 | D | 0.361 | neutral | None | None | None | None | N |
A/L | 0.1907 | likely_benign | 0.218 | benign | -0.106 | Destabilizing | 0.373 | N | 0.37 | neutral | None | None | None | None | N |
A/M | 0.229 | likely_benign | 0.2645 | benign | -0.318 | Destabilizing | 0.984 | D | 0.387 | neutral | None | None | None | None | N |
A/N | 0.2315 | likely_benign | 0.2463 | benign | -0.394 | Destabilizing | 0.742 | D | 0.427 | neutral | None | None | None | None | N |
A/P | 0.1226 | likely_benign | 0.1335 | benign | -0.17 | Destabilizing | 0.007 | N | 0.197 | neutral | N | 0.435421429 | None | None | N |
A/Q | 0.3784 | ambiguous | 0.3723 | ambiguous | -0.526 | Destabilizing | 0.91 | D | 0.4 | neutral | None | None | None | None | N |
A/R | 0.5056 | ambiguous | 0.4719 | ambiguous | -0.299 | Destabilizing | 0.91 | D | 0.403 | neutral | None | None | None | None | N |
A/S | 0.1097 | likely_benign | 0.1145 | benign | -0.714 | Destabilizing | 0.012 | N | 0.167 | neutral | N | 0.492365868 | None | None | N |
A/T | 0.0866 | likely_benign | 0.0993 | benign | -0.67 | Destabilizing | 0.004 | N | 0.127 | neutral | N | 0.410493262 | None | None | N |
A/V | 0.1227 | likely_benign | 0.1447 | benign | -0.17 | Destabilizing | 0.309 | N | 0.319 | neutral | N | 0.484837139 | None | None | N |
A/W | 0.8419 | likely_pathogenic | 0.824 | pathogenic | -0.907 | Destabilizing | 0.996 | D | 0.485 | neutral | None | None | None | None | N |
A/Y | 0.6154 | likely_pathogenic | 0.6192 | pathogenic | -0.492 | Destabilizing | 0.984 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.