Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15247 | 45964;45965;45966 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
N2AB | 13606 | 41041;41042;41043 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
N2A | 12679 | 38260;38261;38262 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
N2B | 6182 | 18769;18770;18771 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
Novex-1 | 6307 | 19144;19145;19146 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
Novex-2 | 6374 | 19345;19346;19347 | chr2:178620871;178620870;178620869 | chr2:179485598;179485597;179485596 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/L | rs373857517 | -0.493 | 0.031 | N | 0.181 | 0.106 | 0.301122078929 | gnomAD-2.1.1 | 1.79E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 3.93E-05 | 0 |
I/L | rs373857517 | -0.493 | 0.031 | N | 0.181 | 0.106 | 0.301122078929 | gnomAD-3.1.2 | 3.95E-05 | None | None | None | None | N | None | 2.42E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.36E-05 | 0 | 0 |
I/L | rs373857517 | -0.493 | 0.031 | N | 0.181 | 0.106 | 0.301122078929 | gnomAD-4.0.0 | 2.72867E-05 | None | None | None | None | N | None | 1.3369E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 3.5619E-05 | 0 | 1.60277E-05 |
I/M | None | None | 0.989 | D | 0.495 | 0.402 | 0.476445137733 | gnomAD-4.0.0 | 1.59365E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86252E-06 | 0 | 0 |
I/T | rs2058158687 | None | 0.98 | D | 0.538 | 0.645 | 0.704871065003 | gnomAD-4.0.0 | 4.79251E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39935E-06 | 1.15982E-05 | 0 |
I/V | rs373857517 | -1.156 | 0.689 | N | 0.409 | 0.213 | 0.52515372042 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/V | rs373857517 | -1.156 | 0.689 | N | 0.409 | 0.213 | 0.52515372042 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs373857517 | -1.156 | 0.689 | N | 0.409 | 0.213 | 0.52515372042 | gnomAD-4.0.0 | 2.63345E-05 | None | None | None | None | N | None | 9.66277E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8657 | likely_pathogenic | 0.871 | pathogenic | -1.778 | Destabilizing | 0.985 | D | 0.468 | neutral | None | None | None | None | N |
I/C | 0.947 | likely_pathogenic | 0.9543 | pathogenic | -0.855 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
I/D | 0.9926 | likely_pathogenic | 0.9912 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
I/E | 0.9861 | likely_pathogenic | 0.9835 | pathogenic | -1.916 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/F | 0.5154 | ambiguous | 0.5475 | ambiguous | -1.185 | Destabilizing | 0.991 | D | 0.479 | neutral | None | None | None | None | N |
I/G | 0.9811 | likely_pathogenic | 0.9816 | pathogenic | -2.258 | Highly Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
I/H | 0.9737 | likely_pathogenic | 0.9743 | pathogenic | -1.852 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/K | 0.965 | likely_pathogenic | 0.9629 | pathogenic | -1.152 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | D | 0.670520522 | None | None | N |
I/L | 0.1635 | likely_benign | 0.1788 | benign | -0.373 | Destabilizing | 0.031 | N | 0.181 | neutral | N | 0.480193388 | None | None | N |
I/M | 0.2653 | likely_benign | 0.2832 | benign | -0.349 | Destabilizing | 0.989 | D | 0.495 | neutral | D | 0.565022999 | None | None | N |
I/N | 0.9271 | likely_pathogenic | 0.9204 | pathogenic | -1.666 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/P | 0.9799 | likely_pathogenic | 0.9762 | pathogenic | -0.827 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/Q | 0.9672 | likely_pathogenic | 0.9654 | pathogenic | -1.416 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/R | 0.9404 | likely_pathogenic | 0.9354 | pathogenic | -1.244 | Destabilizing | 0.998 | D | 0.732 | prob.delet. | D | 0.670520522 | None | None | N |
I/S | 0.913 | likely_pathogenic | 0.9045 | pathogenic | -2.213 | Highly Destabilizing | 0.999 | D | 0.608 | neutral | None | None | None | None | N |
I/T | 0.8728 | likely_pathogenic | 0.8646 | pathogenic | -1.811 | Destabilizing | 0.98 | D | 0.538 | neutral | D | 0.665185034 | None | None | N |
I/V | 0.106 | likely_benign | 0.1195 | benign | -0.827 | Destabilizing | 0.689 | D | 0.409 | neutral | N | 0.502095653 | None | None | N |
I/W | 0.9804 | likely_pathogenic | 0.9822 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/Y | 0.9176 | likely_pathogenic | 0.9216 | pathogenic | -1.15 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.