Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15248 | 45967;45968;45969 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
N2AB | 13607 | 41044;41045;41046 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
N2A | 12680 | 38263;38264;38265 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
N2B | 6183 | 18772;18773;18774 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
Novex-1 | 6308 | 19147;19148;19149 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
Novex-2 | 6375 | 19348;19349;19350 | chr2:178620868;178620867;178620866 | chr2:179485595;179485594;179485593 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.971 | N | 0.539 | 0.441 | 0.454426139905 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
F/L | None | None | 0.822 | N | 0.547 | 0.343 | 0.409937222855 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5699 | likely_pathogenic | 0.5717 | pathogenic | -0.814 | Destabilizing | 0.754 | D | 0.545 | neutral | None | None | None | None | N |
F/C | 0.5692 | likely_pathogenic | 0.6342 | pathogenic | -0.43 | Destabilizing | 0.997 | D | 0.601 | neutral | N | 0.508851495 | None | None | N |
F/D | 0.8388 | likely_pathogenic | 0.8109 | pathogenic | 0.63 | Stabilizing | 0.956 | D | 0.644 | neutral | None | None | None | None | N |
F/E | 0.8302 | likely_pathogenic | 0.8275 | pathogenic | 0.61 | Stabilizing | 0.915 | D | 0.565 | neutral | None | None | None | None | N |
F/G | 0.8004 | likely_pathogenic | 0.7866 | pathogenic | -0.975 | Destabilizing | 0.956 | D | 0.568 | neutral | None | None | None | None | N |
F/H | 0.6654 | likely_pathogenic | 0.6759 | pathogenic | 0.278 | Stabilizing | 0.994 | D | 0.563 | neutral | None | None | None | None | N |
F/I | 0.3012 | likely_benign | 0.3605 | ambiguous | -0.412 | Destabilizing | 0.971 | D | 0.539 | neutral | N | 0.494039232 | None | None | N |
F/K | 0.8357 | likely_pathogenic | 0.8142 | pathogenic | -0.164 | Destabilizing | 0.915 | D | 0.59 | neutral | None | None | None | None | N |
F/L | 0.8724 | likely_pathogenic | 0.8934 | pathogenic | -0.412 | Destabilizing | 0.822 | D | 0.547 | neutral | N | 0.506602692 | None | None | N |
F/M | 0.6299 | likely_pathogenic | 0.6658 | pathogenic | -0.487 | Destabilizing | 0.978 | D | 0.558 | neutral | None | None | None | None | N |
F/N | 0.7004 | likely_pathogenic | 0.6866 | pathogenic | -0.224 | Destabilizing | 0.956 | D | 0.652 | neutral | None | None | None | None | N |
F/P | 0.9222 | likely_pathogenic | 0.9166 | pathogenic | -0.529 | Destabilizing | 0.978 | D | 0.656 | neutral | None | None | None | None | N |
F/Q | 0.7824 | likely_pathogenic | 0.7839 | pathogenic | -0.219 | Destabilizing | 0.16 | N | 0.453 | neutral | None | None | None | None | N |
F/R | 0.6996 | likely_pathogenic | 0.6722 | pathogenic | 0.187 | Stabilizing | 0.915 | D | 0.654 | neutral | None | None | None | None | N |
F/S | 0.4317 | ambiguous | 0.4416 | ambiguous | -0.807 | Destabilizing | 0.89 | D | 0.501 | neutral | N | 0.488669419 | None | None | N |
F/T | 0.5012 | ambiguous | 0.5037 | ambiguous | -0.738 | Destabilizing | 0.956 | D | 0.543 | neutral | None | None | None | None | N |
F/V | 0.2896 | likely_benign | 0.3472 | ambiguous | -0.529 | Destabilizing | 0.822 | D | 0.559 | neutral | N | 0.507322795 | None | None | N |
F/W | 0.6277 | likely_pathogenic | 0.6151 | pathogenic | -0.317 | Destabilizing | 0.998 | D | 0.541 | neutral | None | None | None | None | N |
F/Y | 0.2604 | likely_benign | 0.2752 | benign | -0.307 | Destabilizing | 0.904 | D | 0.545 | neutral | N | 0.508658802 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.