Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15259 | 46000;46001;46002 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
N2AB | 13618 | 41077;41078;41079 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
N2A | 12691 | 38296;38297;38298 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
N2B | 6194 | 18805;18806;18807 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
Novex-1 | 6319 | 19180;19181;19182 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
Novex-2 | 6386 | 19381;19382;19383 | chr2:178620835;178620834;178620833 | chr2:179485562;179485561;179485560 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.997 | D | 0.662 | 0.496 | 0.445210270852 | gnomAD-4.0.0 | 4.10766E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39933E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.561 | ambiguous | 0.4554 | ambiguous | -0.151 | Destabilizing | 0.955 | D | 0.566 | neutral | N | 0.493246404 | None | None | N |
D/C | 0.936 | likely_pathogenic | 0.8823 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
D/E | 0.4233 | ambiguous | 0.3374 | benign | -0.2 | Destabilizing | 0.989 | D | 0.461 | neutral | N | 0.486545242 | None | None | N |
D/F | 0.8802 | likely_pathogenic | 0.8201 | pathogenic | -0.079 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
D/G | 0.3162 | likely_benign | 0.2379 | benign | -0.322 | Destabilizing | 0.117 | N | 0.381 | neutral | N | 0.438574827 | None | None | N |
D/H | 0.6755 | likely_pathogenic | 0.572 | pathogenic | 0.322 | Stabilizing | 1.0 | D | 0.66 | neutral | N | 0.520064345 | None | None | N |
D/I | 0.8742 | likely_pathogenic | 0.7969 | pathogenic | 0.249 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/K | 0.8177 | likely_pathogenic | 0.7348 | pathogenic | 0.138 | Stabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
D/L | 0.8409 | likely_pathogenic | 0.7538 | pathogenic | 0.249 | Stabilizing | 0.998 | D | 0.663 | neutral | None | None | None | None | N |
D/M | 0.935 | likely_pathogenic | 0.8886 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
D/N | 0.1928 | likely_benign | 0.1539 | benign | -0.07 | Destabilizing | 0.993 | D | 0.635 | neutral | N | 0.436736326 | None | None | N |
D/P | 0.9245 | likely_pathogenic | 0.8914 | pathogenic | 0.137 | Stabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
D/Q | 0.7728 | likely_pathogenic | 0.6683 | pathogenic | -0.036 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
D/R | 0.8259 | likely_pathogenic | 0.7441 | pathogenic | 0.434 | Stabilizing | 0.998 | D | 0.665 | neutral | None | None | None | None | N |
D/S | 0.3823 | ambiguous | 0.295 | benign | -0.215 | Destabilizing | 0.983 | D | 0.592 | neutral | None | None | None | None | N |
D/T | 0.7386 | likely_pathogenic | 0.6299 | pathogenic | -0.082 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
D/V | 0.7079 | likely_pathogenic | 0.5986 | pathogenic | 0.137 | Stabilizing | 0.997 | D | 0.662 | neutral | D | 0.56300289 | None | None | N |
D/W | 0.9712 | likely_pathogenic | 0.9542 | pathogenic | 0.014 | Stabilizing | 1.0 | D | 0.712 | prob.delet. | None | None | None | None | N |
D/Y | 0.4694 | ambiguous | 0.3739 | ambiguous | 0.14 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.450656427 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.