Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15262 | 46009;46010;46011 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
N2AB | 13621 | 41086;41087;41088 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
N2A | 12694 | 38305;38306;38307 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
N2B | 6197 | 18814;18815;18816 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
Novex-1 | 6322 | 19189;19190;19191 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
Novex-2 | 6389 | 19390;19391;19392 | chr2:178620826;178620825;178620824 | chr2:179485553;179485552;179485551 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs2058153201 | None | 0.031 | N | 0.351 | 0.196 | 0.206339911435 | gnomAD-4.0.0 | 1.5934E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0303E-05 |
Y/S | None | None | 0.998 | N | 0.804 | 0.521 | 0.459729313489 | gnomAD-4.0.0 | 3.18679E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86673E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9624 | likely_pathogenic | 0.9392 | pathogenic | -2.921 | Highly Destabilizing | 0.985 | D | 0.776 | deleterious | None | None | None | None | N |
Y/C | 0.4927 | ambiguous | 0.3476 | ambiguous | -1.753 | Destabilizing | 1.0 | D | 0.781 | deleterious | N | 0.441867591 | None | None | N |
Y/D | 0.9832 | likely_pathogenic | 0.9745 | pathogenic | -2.641 | Highly Destabilizing | 0.998 | D | 0.839 | deleterious | N | 0.476253081 | None | None | N |
Y/E | 0.9942 | likely_pathogenic | 0.9918 | pathogenic | -2.468 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
Y/F | 0.1476 | likely_benign | 0.1283 | benign | -1.023 | Destabilizing | 0.031 | N | 0.351 | neutral | N | 0.421652289 | None | None | N |
Y/G | 0.9659 | likely_pathogenic | 0.943 | pathogenic | -3.325 | Highly Destabilizing | 0.999 | D | 0.824 | deleterious | None | None | None | None | N |
Y/H | 0.7034 | likely_pathogenic | 0.6718 | pathogenic | -1.774 | Destabilizing | 0.998 | D | 0.763 | deleterious | N | 0.409677989 | None | None | N |
Y/I | 0.9265 | likely_pathogenic | 0.8802 | pathogenic | -1.607 | Destabilizing | 0.97 | D | 0.787 | deleterious | None | None | None | None | N |
Y/K | 0.9899 | likely_pathogenic | 0.9862 | pathogenic | -1.819 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Y/L | 0.8761 | likely_pathogenic | 0.813 | pathogenic | -1.607 | Destabilizing | 0.871 | D | 0.753 | deleterious | None | None | None | None | N |
Y/M | 0.9464 | likely_pathogenic | 0.9138 | pathogenic | -1.41 | Destabilizing | 0.999 | D | 0.794 | deleterious | None | None | None | None | N |
Y/N | 0.8933 | likely_pathogenic | 0.8509 | pathogenic | -2.411 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | N | 0.451022485 | None | None | N |
Y/P | 0.9975 | likely_pathogenic | 0.9953 | pathogenic | -2.054 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | None | None | None | None | N |
Y/Q | 0.978 | likely_pathogenic | 0.9707 | pathogenic | -2.242 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
Y/R | 0.9687 | likely_pathogenic | 0.9613 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
Y/S | 0.8879 | likely_pathogenic | 0.8305 | pathogenic | -2.905 | Highly Destabilizing | 0.998 | D | 0.804 | deleterious | N | 0.444883677 | None | None | N |
Y/T | 0.96 | likely_pathogenic | 0.9387 | pathogenic | -2.617 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
Y/V | 0.8657 | likely_pathogenic | 0.7953 | pathogenic | -2.054 | Highly Destabilizing | 0.97 | D | 0.767 | deleterious | None | None | None | None | N |
Y/W | 0.6955 | likely_pathogenic | 0.6472 | pathogenic | -0.364 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.