Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15264 | 46015;46016;46017 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
N2AB | 13623 | 41092;41093;41094 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
N2A | 12696 | 38311;38312;38313 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
N2B | 6199 | 18820;18821;18822 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
Novex-1 | 6324 | 19195;19196;19197 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
Novex-2 | 6391 | 19396;19397;19398 | chr2:178620820;178620819;178620818 | chr2:179485547;179485546;179485545 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | D | 0.813 | 0.72 | 0.752632724806 | gnomAD-4.0.0 | 4.79222E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29921E-06 | 0 | 0 |
L/P | None | None | 1.0 | D | 0.915 | 0.865 | 0.911412973807 | gnomAD-4.0.0 | 1.59332E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43328E-05 | 0 |
L/V | None | None | 0.999 | D | 0.623 | 0.662 | 0.726062263 | gnomAD-4.0.0 | 6.84603E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15969E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9643 | likely_pathogenic | 0.9585 | pathogenic | -2.4 | Highly Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
L/C | 0.9549 | likely_pathogenic | 0.935 | pathogenic | -1.47 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -3.075 | Highly Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
L/E | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -2.774 | Highly Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
L/F | 0.7204 | likely_pathogenic | 0.6981 | pathogenic | -1.519 | Destabilizing | 1.0 | D | 0.813 | deleterious | D | 0.666459122 | None | None | N |
L/G | 0.994 | likely_pathogenic | 0.9929 | pathogenic | -2.935 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
L/H | 0.9941 | likely_pathogenic | 0.9932 | pathogenic | -2.858 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | D | 0.729659832 | None | None | N |
L/I | 0.3914 | ambiguous | 0.405 | ambiguous | -0.766 | Destabilizing | 0.999 | D | 0.617 | neutral | D | 0.687518662 | None | None | N |
L/K | 0.9954 | likely_pathogenic | 0.9953 | pathogenic | -1.885 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/M | 0.3366 | likely_benign | 0.3482 | ambiguous | -0.991 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
L/N | 0.9981 | likely_pathogenic | 0.9979 | pathogenic | -2.675 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
L/P | 0.9989 | likely_pathogenic | 0.9989 | pathogenic | -1.307 | Destabilizing | 1.0 | D | 0.915 | deleterious | D | 0.729659832 | None | None | N |
L/Q | 0.9882 | likely_pathogenic | 0.9884 | pathogenic | -2.234 | Highly Destabilizing | 1.0 | D | 0.918 | deleterious | None | None | None | None | N |
L/R | 0.9906 | likely_pathogenic | 0.9896 | pathogenic | -2.207 | Highly Destabilizing | 1.0 | D | 0.913 | deleterious | D | 0.729659832 | None | None | N |
L/S | 0.9953 | likely_pathogenic | 0.9947 | pathogenic | -3.01 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/T | 0.9872 | likely_pathogenic | 0.9861 | pathogenic | -2.552 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/V | 0.4587 | ambiguous | 0.4479 | ambiguous | -1.307 | Destabilizing | 0.999 | D | 0.623 | neutral | D | 0.689781353 | None | None | N |
L/W | 0.9827 | likely_pathogenic | 0.9799 | pathogenic | -1.788 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/Y | 0.9846 | likely_pathogenic | 0.9808 | pathogenic | -1.693 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.