Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1527 | 4804;4805;4806 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
N2AB | 1527 | 4804;4805;4806 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
N2A | 1527 | 4804;4805;4806 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
N2B | 1481 | 4666;4667;4668 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
Novex-1 | 1481 | 4666;4667;4668 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
Novex-2 | 1481 | 4666;4667;4668 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
Novex-3 | 1527 | 4804;4805;4806 | chr2:178777486;178777485;178777484 | chr2:179642213;179642212;179642211 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | D | 0.76 | 0.7 | 0.718278560113 | gnomAD-4.0.0 | 1.59098E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85695E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1793 | likely_benign | 0.1965 | benign | -0.802 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | N | 0.511977946 | None | None | I |
E/C | 0.8656 | likely_pathogenic | 0.8852 | pathogenic | -0.281 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | I |
E/D | 0.1879 | likely_benign | 0.2217 | benign | -0.988 | Destabilizing | 0.999 | D | 0.553 | neutral | D | 0.5747723 | None | None | I |
E/F | 0.7575 | likely_pathogenic | 0.7926 | pathogenic | -0.758 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | I |
E/G | 0.2978 | likely_benign | 0.3312 | benign | -1.105 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.71345337 | None | None | I |
E/H | 0.4793 | ambiguous | 0.5223 | ambiguous | -1.107 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/I | 0.3098 | likely_benign | 0.3392 | benign | 0.004 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
E/K | 0.13 | likely_benign | 0.1421 | benign | -0.422 | Destabilizing | 0.999 | D | 0.65 | neutral | N | 0.502167825 | None | None | I |
E/L | 0.3573 | ambiguous | 0.4001 | ambiguous | 0.004 | Stabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
E/M | 0.4178 | ambiguous | 0.4523 | ambiguous | 0.531 | Stabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | I |
E/N | 0.2283 | likely_benign | 0.2783 | benign | -0.726 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
E/P | 0.6794 | likely_pathogenic | 0.715 | pathogenic | -0.244 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/Q | 0.1366 | likely_benign | 0.1502 | benign | -0.65 | Destabilizing | 1.0 | D | 0.635 | neutral | N | 0.509020124 | None | None | I |
E/R | 0.2639 | likely_benign | 0.2824 | benign | -0.362 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | None | None | None | None | I |
E/S | 0.212 | likely_benign | 0.2511 | benign | -1.014 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
E/T | 0.1983 | likely_benign | 0.2267 | benign | -0.763 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
E/V | 0.2034 | likely_benign | 0.2224 | benign | -0.244 | Destabilizing | 1.0 | D | 0.793 | deleterious | N | 0.511074059 | None | None | I |
E/W | 0.9323 | likely_pathogenic | 0.9427 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | I |
E/Y | 0.6775 | likely_pathogenic | 0.7151 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.