Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15276 | 46051;46052;46053 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
N2AB | 13635 | 41128;41129;41130 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
N2A | 12708 | 38347;38348;38349 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
N2B | 6211 | 18856;18857;18858 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
Novex-1 | 6336 | 19231;19232;19233 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
Novex-2 | 6403 | 19432;19433;19434 | chr2:178620784;178620783;178620782 | chr2:179485511;179485510;179485509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 0.912 | N | 0.561 | 0.182 | 0.366277470483 | gnomAD-4.0.0 | 1.59329E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86261E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1316 | likely_benign | 0.1613 | benign | -0.757 | Destabilizing | 0.116 | N | 0.519 | neutral | None | None | None | None | N |
N/C | 0.1924 | likely_benign | 0.2263 | benign | -0.013 | Destabilizing | 0.944 | D | 0.598 | neutral | None | None | None | None | N |
N/D | 0.1146 | likely_benign | 0.1256 | benign | -1.373 | Destabilizing | 0.09 | N | 0.554 | neutral | N | 0.500841304 | None | None | N |
N/E | 0.2601 | likely_benign | 0.3234 | benign | -1.249 | Destabilizing | 0.008 | N | 0.223 | neutral | None | None | None | None | N |
N/F | 0.349 | ambiguous | 0.405 | ambiguous | -0.568 | Destabilizing | 0.818 | D | 0.607 | neutral | None | None | None | None | N |
N/G | 0.2218 | likely_benign | 0.2769 | benign | -1.118 | Destabilizing | 0.207 | N | 0.525 | neutral | None | None | None | None | N |
N/H | 0.0885 | likely_benign | 0.1004 | benign | -0.976 | Destabilizing | 0.912 | D | 0.561 | neutral | N | 0.497454077 | None | None | N |
N/I | 0.1165 | likely_benign | 0.1275 | benign | 0.169 | Stabilizing | 0.457 | N | 0.616 | neutral | N | 0.479683748 | None | None | N |
N/K | 0.1522 | likely_benign | 0.202 | benign | -0.306 | Destabilizing | 0.324 | N | 0.521 | neutral | N | 0.486978154 | None | None | N |
N/L | 0.1604 | likely_benign | 0.1847 | benign | 0.169 | Stabilizing | 0.241 | N | 0.547 | neutral | None | None | None | None | N |
N/M | 0.235 | likely_benign | 0.2751 | benign | 0.728 | Stabilizing | 0.944 | D | 0.589 | neutral | None | None | None | None | N |
N/P | 0.4063 | ambiguous | 0.4723 | ambiguous | -0.109 | Destabilizing | 0.818 | D | 0.601 | neutral | None | None | None | None | N |
N/Q | 0.2102 | likely_benign | 0.2764 | benign | -1.059 | Destabilizing | 0.69 | D | 0.537 | neutral | None | None | None | None | N |
N/R | 0.1624 | likely_benign | 0.2182 | benign | -0.362 | Destabilizing | 0.388 | N | 0.52 | neutral | None | None | None | None | N |
N/S | 0.0658 | likely_benign | 0.0727 | benign | -1.003 | Destabilizing | 0.09 | N | 0.545 | neutral | N | 0.471462844 | None | None | N |
N/T | 0.0848 | likely_benign | 0.0948 | benign | -0.694 | Destabilizing | 0.001 | N | 0.175 | neutral | N | 0.427976954 | None | None | N |
N/V | 0.1287 | likely_benign | 0.145 | benign | -0.109 | Destabilizing | 0.241 | N | 0.561 | neutral | None | None | None | None | N |
N/W | 0.6443 | likely_pathogenic | 0.7106 | pathogenic | -0.43 | Destabilizing | 0.981 | D | 0.627 | neutral | None | None | None | None | N |
N/Y | 0.1264 | likely_benign | 0.1358 | benign | -0.142 | Destabilizing | 0.773 | D | 0.613 | neutral | D | 0.531036961 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.