Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15277 | 46054;46055;46056 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
N2AB | 13636 | 41131;41132;41133 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
N2A | 12709 | 38350;38351;38352 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
N2B | 6212 | 18859;18860;18861 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
Novex-1 | 6337 | 19234;19235;19236 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
Novex-2 | 6404 | 19435;19436;19437 | chr2:178620781;178620780;178620779 | chr2:179485508;179485507;179485506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1274378566 | -1.343 | 0.976 | D | 0.858 | 0.792 | 0.663428526802 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
Y/C | rs1274378566 | -1.343 | 0.976 | D | 0.858 | 0.792 | 0.663428526802 | gnomAD-4.0.0 | 1.59329E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86266E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9947 | likely_pathogenic | 0.9931 | pathogenic | -2.538 | Highly Destabilizing | 0.399 | N | 0.83 | deleterious | None | None | None | None | N |
Y/C | 0.866 | likely_pathogenic | 0.8494 | pathogenic | -2.111 | Highly Destabilizing | 0.976 | D | 0.858 | deleterious | D | 0.725220853 | None | None | N |
Y/D | 0.995 | likely_pathogenic | 0.9912 | pathogenic | -3.496 | Highly Destabilizing | 0.916 | D | 0.875 | deleterious | D | 0.725220853 | None | None | N |
Y/E | 0.998 | likely_pathogenic | 0.997 | pathogenic | -3.261 | Highly Destabilizing | 0.826 | D | 0.857 | deleterious | None | None | None | None | N |
Y/F | 0.2185 | likely_benign | 0.2136 | benign | -0.945 | Destabilizing | 0.001 | N | 0.367 | neutral | D | 0.545738876 | None | None | N |
Y/G | 0.9883 | likely_pathogenic | 0.9837 | pathogenic | -2.982 | Highly Destabilizing | 0.826 | D | 0.854 | deleterious | None | None | None | None | N |
Y/H | 0.9577 | likely_pathogenic | 0.9472 | pathogenic | -2.244 | Highly Destabilizing | 0.916 | D | 0.682 | prob.neutral | D | 0.725828282 | None | None | N |
Y/I | 0.9128 | likely_pathogenic | 0.9144 | pathogenic | -1.059 | Destabilizing | 0.539 | D | 0.769 | deleterious | None | None | None | None | N |
Y/K | 0.9969 | likely_pathogenic | 0.9956 | pathogenic | -2.29 | Highly Destabilizing | 0.826 | D | 0.862 | deleterious | None | None | None | None | N |
Y/L | 0.8865 | likely_pathogenic | 0.8857 | pathogenic | -1.059 | Destabilizing | 0.25 | N | 0.743 | deleterious | None | None | None | None | N |
Y/M | 0.9777 | likely_pathogenic | 0.9761 | pathogenic | -1.189 | Destabilizing | 0.947 | D | 0.779 | deleterious | None | None | None | None | N |
Y/N | 0.9799 | likely_pathogenic | 0.9731 | pathogenic | -3.258 | Highly Destabilizing | 0.916 | D | 0.859 | deleterious | D | 0.725220853 | None | None | N |
Y/P | 0.9982 | likely_pathogenic | 0.9972 | pathogenic | -1.569 | Destabilizing | 0.935 | D | 0.885 | deleterious | None | None | None | None | N |
Y/Q | 0.9973 | likely_pathogenic | 0.9962 | pathogenic | -2.845 | Highly Destabilizing | 0.935 | D | 0.765 | deleterious | None | None | None | None | N |
Y/R | 0.9901 | likely_pathogenic | 0.9862 | pathogenic | -2.431 | Highly Destabilizing | 0.826 | D | 0.857 | deleterious | None | None | None | None | N |
Y/S | 0.9853 | likely_pathogenic | 0.9809 | pathogenic | -3.52 | Highly Destabilizing | 0.781 | D | 0.844 | deleterious | D | 0.725220853 | None | None | N |
Y/T | 0.9922 | likely_pathogenic | 0.9906 | pathogenic | -3.14 | Highly Destabilizing | 0.826 | D | 0.849 | deleterious | None | None | None | None | N |
Y/V | 0.8998 | likely_pathogenic | 0.8913 | pathogenic | -1.569 | Destabilizing | 0.25 | N | 0.759 | deleterious | None | None | None | None | N |
Y/W | 0.7277 | likely_pathogenic | 0.7435 | pathogenic | -0.381 | Destabilizing | 0.826 | D | 0.703 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.