Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15282 | 46069;46070;46071 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
N2AB | 13641 | 41146;41147;41148 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
N2A | 12714 | 38365;38366;38367 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
N2B | 6217 | 18874;18875;18876 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
Novex-1 | 6342 | 19249;19250;19251 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
Novex-2 | 6409 | 19450;19451;19452 | chr2:178620766;178620765;178620764 | chr2:179485493;179485492;179485491 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1248616113 | None | 0.046 | D | 0.285 | 0.194 | 0.314417295294 | gnomAD-4.0.0 | 4.79218E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29941E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1145 | likely_benign | 0.1178 | benign | -0.859 | Destabilizing | 0.046 | N | 0.285 | neutral | D | 0.556422187 | None | None | N |
T/C | 0.5303 | ambiguous | 0.5142 | ambiguous | -0.642 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/D | 0.6707 | likely_pathogenic | 0.6887 | pathogenic | -0.647 | Destabilizing | 0.986 | D | 0.622 | neutral | None | None | None | None | N |
T/E | 0.4838 | ambiguous | 0.4997 | ambiguous | -0.65 | Destabilizing | 0.986 | D | 0.63 | neutral | None | None | None | None | N |
T/F | 0.3524 | ambiguous | 0.3427 | ambiguous | -1.186 | Destabilizing | 0.993 | D | 0.767 | deleterious | None | None | None | None | N |
T/G | 0.3919 | ambiguous | 0.3846 | ambiguous | -1.08 | Destabilizing | 0.91 | D | 0.672 | neutral | None | None | None | None | N |
T/H | 0.3593 | ambiguous | 0.3688 | ambiguous | -1.49 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
T/I | 0.2178 | likely_benign | 0.212 | benign | -0.361 | Destabilizing | 0.982 | D | 0.672 | neutral | D | 0.547050884 | None | None | N |
T/K | 0.3378 | likely_benign | 0.3512 | ambiguous | -0.613 | Destabilizing | 0.986 | D | 0.634 | neutral | None | None | None | None | N |
T/L | 0.1606 | likely_benign | 0.1516 | benign | -0.361 | Destabilizing | 0.953 | D | 0.596 | neutral | None | None | None | None | N |
T/M | 0.1234 | likely_benign | 0.118 | benign | 0.092 | Stabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
T/N | 0.205 | likely_benign | 0.2063 | benign | -0.655 | Destabilizing | 0.982 | D | 0.641 | neutral | D | 0.576009236 | None | None | N |
T/P | 0.5679 | likely_pathogenic | 0.6344 | pathogenic | -0.498 | Destabilizing | 0.991 | D | 0.678 | prob.neutral | D | 0.642422197 | None | None | N |
T/Q | 0.276 | likely_benign | 0.279 | benign | -0.928 | Destabilizing | 0.993 | D | 0.691 | prob.neutral | None | None | None | None | N |
T/R | 0.254 | likely_benign | 0.2646 | benign | -0.375 | Destabilizing | 0.986 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/S | 0.1389 | likely_benign | 0.1358 | benign | -0.899 | Destabilizing | 0.17 | N | 0.36 | neutral | N | 0.503765598 | None | None | N |
T/V | 0.1803 | likely_benign | 0.1731 | benign | -0.498 | Destabilizing | 0.91 | D | 0.587 | neutral | None | None | None | None | N |
T/W | 0.7031 | likely_pathogenic | 0.6968 | pathogenic | -1.113 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
T/Y | 0.4188 | ambiguous | 0.4177 | ambiguous | -0.825 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.