Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15284 | 46075;46076;46077 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
N2AB | 13643 | 41152;41153;41154 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
N2A | 12716 | 38371;38372;38373 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
N2B | 6219 | 18880;18881;18882 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
Novex-1 | 6344 | 19255;19256;19257 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
Novex-2 | 6411 | 19456;19457;19458 | chr2:178620760;178620759;178620758 | chr2:179485487;179485486;179485485 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.101 | N | 0.249 | 0.123 | 0.209622950755 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2673 | likely_benign | 0.2288 | benign | 0.34 | Stabilizing | 0.061 | N | 0.259 | neutral | None | None | None | None | N |
H/C | 0.2997 | likely_benign | 0.295 | benign | 0.504 | Stabilizing | 0.983 | D | 0.209 | neutral | None | None | None | None | N |
H/D | 0.2245 | likely_benign | 0.2284 | benign | -0.035 | Destabilizing | 0.183 | N | 0.291 | neutral | N | 0.434670283 | None | None | N |
H/E | 0.2989 | likely_benign | 0.2892 | benign | -0.042 | Destabilizing | 0.061 | N | 0.237 | neutral | None | None | None | None | N |
H/F | 0.3902 | ambiguous | 0.3524 | ambiguous | 0.721 | Stabilizing | 0.94 | D | 0.328 | neutral | None | None | None | None | N |
H/G | 0.3403 | ambiguous | 0.3117 | benign | 0.133 | Stabilizing | 0.228 | N | 0.279 | neutral | None | None | None | None | N |
H/I | 0.3205 | likely_benign | 0.2868 | benign | 0.837 | Stabilizing | 0.593 | D | 0.261 | neutral | None | None | None | None | N |
H/K | 0.285 | likely_benign | 0.2673 | benign | 0.284 | Stabilizing | 0.129 | N | 0.297 | neutral | None | None | None | None | N |
H/L | 0.1323 | likely_benign | 0.1196 | benign | 0.837 | Stabilizing | 0.183 | N | 0.231 | neutral | N | 0.47456989 | None | None | N |
H/M | 0.498 | ambiguous | 0.4425 | ambiguous | 0.613 | Stabilizing | 0.836 | D | 0.27 | neutral | None | None | None | None | N |
H/N | 0.0948 | likely_benign | 0.0874 | benign | 0.255 | Stabilizing | 0.183 | N | 0.253 | neutral | N | 0.474184059 | None | None | N |
H/P | 0.1454 | likely_benign | 0.1391 | benign | 0.695 | Stabilizing | 0.523 | D | 0.327 | neutral | N | 0.41999239 | None | None | N |
H/Q | 0.1514 | likely_benign | 0.1342 | benign | 0.282 | Stabilizing | 0.001 | N | 0.166 | neutral | N | 0.366355192 | None | None | N |
H/R | 0.1272 | likely_benign | 0.132 | benign | -0.09 | Destabilizing | 0.101 | N | 0.249 | neutral | N | 0.482578572 | None | None | N |
H/S | 0.1905 | likely_benign | 0.1724 | benign | 0.293 | Stabilizing | 0.012 | N | 0.155 | neutral | None | None | None | None | N |
H/T | 0.2835 | likely_benign | 0.2471 | benign | 0.377 | Stabilizing | 0.129 | N | 0.24 | neutral | None | None | None | None | N |
H/V | 0.2778 | likely_benign | 0.2477 | benign | 0.695 | Stabilizing | 0.418 | N | 0.27 | neutral | None | None | None | None | N |
H/W | 0.5073 | ambiguous | 0.5189 | ambiguous | 0.608 | Stabilizing | 0.983 | D | 0.258 | neutral | None | None | None | None | N |
H/Y | 0.1369 | likely_benign | 0.1323 | benign | 0.924 | Stabilizing | 0.523 | D | 0.336 | neutral | N | 0.475035349 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.