Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15302 | 46129;46130;46131 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
N2AB | 13661 | 41206;41207;41208 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
N2A | 12734 | 38425;38426;38427 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
N2B | 6237 | 18934;18935;18936 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
Novex-1 | 6362 | 19309;19310;19311 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
Novex-2 | 6429 | 19510;19511;19512 | chr2:178620617;178620616;178620615 | chr2:179485344;179485343;179485342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1229771826 | None | 1.0 | D | 0.649 | 0.416 | 0.735594876934 | gnomAD-3.1.2 | 6.59E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1229771826 | None | 1.0 | D | 0.649 | 0.416 | 0.735594876934 | gnomAD-4.0.0 | 1.24573E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69868E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6155 | likely_pathogenic | 0.6119 | pathogenic | -1.591 | Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
L/C | 0.7843 | likely_pathogenic | 0.7874 | pathogenic | -0.987 | Destabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
L/D | 0.9194 | likely_pathogenic | 0.9155 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
L/E | 0.7534 | likely_pathogenic | 0.7535 | pathogenic | -1.032 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
L/F | 0.456 | ambiguous | 0.3891 | ambiguous | -1.17 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.570420335 | None | None | N |
L/G | 0.8485 | likely_pathogenic | 0.8496 | pathogenic | -1.903 | Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
L/H | 0.7564 | likely_pathogenic | 0.7231 | pathogenic | -1.1 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.573257311 | None | None | N |
L/I | 0.1761 | likely_benign | 0.1566 | benign | -0.816 | Destabilizing | 0.999 | D | 0.515 | neutral | N | 0.49335802 | None | None | N |
L/K | 0.706 | likely_pathogenic | 0.7022 | pathogenic | -1.114 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
L/M | 0.2651 | likely_benign | 0.2399 | benign | -0.633 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
L/N | 0.7622 | likely_pathogenic | 0.7586 | pathogenic | -0.888 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
L/P | 0.6068 | likely_pathogenic | 0.6065 | pathogenic | -1.042 | Destabilizing | 1.0 | D | 0.749 | deleterious | D | 0.573257311 | None | None | N |
L/Q | 0.6069 | likely_pathogenic | 0.5919 | pathogenic | -1.078 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
L/R | 0.6436 | likely_pathogenic | 0.637 | pathogenic | -0.494 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.572233192 | None | None | N |
L/S | 0.7292 | likely_pathogenic | 0.6829 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
L/T | 0.4788 | ambiguous | 0.4747 | ambiguous | -1.374 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
L/V | 0.1876 | likely_benign | 0.1856 | benign | -1.042 | Destabilizing | 0.999 | D | 0.557 | neutral | N | 0.488228951 | None | None | N |
L/W | 0.6894 | likely_pathogenic | 0.6266 | pathogenic | -1.217 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/Y | 0.7566 | likely_pathogenic | 0.7336 | pathogenic | -1.005 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.