Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1530246129;46130;46131 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
N2AB1366141206;41207;41208 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
N2A1273438425;38426;38427 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
N2B623718934;18935;18936 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
Novex-1636219309;19310;19311 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
Novex-2642919510;19511;19512 chr2:178620617;178620616;178620615chr2:179485344;179485343;179485342
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTT
  • RefSeq wild type template codon: GAA
  • Domain: Ig-105
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.379
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F rs1229771826 None 1.0 D 0.649 0.416 0.735594876934 gnomAD-3.1.2 6.59E-06 None None None None N None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/F rs1229771826 None 1.0 D 0.649 0.416 0.735594876934 gnomAD-4.0.0 1.24573E-06 None None None None N None 0 0 None 0 0 None 0 0 1.69868E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.6155 likely_pathogenic 0.6119 pathogenic -1.591 Destabilizing 0.999 D 0.62 neutral None None None None N
L/C 0.7843 likely_pathogenic 0.7874 pathogenic -0.987 Destabilizing 1.0 D 0.639 neutral None None None None N
L/D 0.9194 likely_pathogenic 0.9155 pathogenic -1.02 Destabilizing 1.0 D 0.748 deleterious None None None None N
L/E 0.7534 likely_pathogenic 0.7535 pathogenic -1.032 Destabilizing 1.0 D 0.774 deleterious None None None None N
L/F 0.456 ambiguous 0.3891 ambiguous -1.17 Destabilizing 1.0 D 0.649 neutral D 0.570420335 None None N
L/G 0.8485 likely_pathogenic 0.8496 pathogenic -1.903 Destabilizing 1.0 D 0.776 deleterious None None None None N
L/H 0.7564 likely_pathogenic 0.7231 pathogenic -1.1 Destabilizing 1.0 D 0.729 prob.delet. D 0.573257311 None None N
L/I 0.1761 likely_benign 0.1566 benign -0.816 Destabilizing 0.999 D 0.515 neutral N 0.49335802 None None N
L/K 0.706 likely_pathogenic 0.7022 pathogenic -1.114 Destabilizing 1.0 D 0.761 deleterious None None None None N
L/M 0.2651 likely_benign 0.2399 benign -0.633 Destabilizing 1.0 D 0.6 neutral None None None None N
L/N 0.7622 likely_pathogenic 0.7586 pathogenic -0.888 Destabilizing 1.0 D 0.75 deleterious None None None None N
L/P 0.6068 likely_pathogenic 0.6065 pathogenic -1.042 Destabilizing 1.0 D 0.749 deleterious D 0.573257311 None None N
L/Q 0.6069 likely_pathogenic 0.5919 pathogenic -1.078 Destabilizing 1.0 D 0.736 prob.delet. None None None None N
L/R 0.6436 likely_pathogenic 0.637 pathogenic -0.494 Destabilizing 1.0 D 0.76 deleterious D 0.572233192 None None N
L/S 0.7292 likely_pathogenic 0.6829 pathogenic -1.482 Destabilizing 1.0 D 0.765 deleterious None None None None N
L/T 0.4788 ambiguous 0.4747 ambiguous -1.374 Destabilizing 1.0 D 0.714 prob.delet. None None None None N
L/V 0.1876 likely_benign 0.1856 benign -1.042 Destabilizing 0.999 D 0.557 neutral N 0.488228951 None None N
L/W 0.6894 likely_pathogenic 0.6266 pathogenic -1.217 Destabilizing 1.0 D 0.717 prob.delet. None None None None N
L/Y 0.7566 likely_pathogenic 0.7336 pathogenic -1.005 Destabilizing 1.0 D 0.679 prob.neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.