Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15308 | 46147;46148;46149 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
N2AB | 13667 | 41224;41225;41226 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
N2A | 12740 | 38443;38444;38445 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
N2B | 6243 | 18952;18953;18954 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
Novex-1 | 6368 | 19327;19328;19329 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
Novex-2 | 6435 | 19528;19529;19530 | chr2:178620599;178620598;178620597 | chr2:179485326;179485325;179485324 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 0.1 | N | 0.533 | 0.16 | 0.479744053436 | gnomAD-4.0.0 | 1.59934E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04136E-05 |
L/V | None | None | 0.76 | D | 0.505 | 0.241 | 0.468917363747 | gnomAD-4.0.0 | 1.60035E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79189E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8517 | likely_pathogenic | 0.7817 | pathogenic | -2.169 | Highly Destabilizing | 0.953 | D | 0.58 | neutral | None | None | None | None | N |
L/C | 0.905 | likely_pathogenic | 0.8822 | pathogenic | -1.288 | Destabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
L/D | 0.9986 | likely_pathogenic | 0.9967 | pathogenic | -2.351 | Highly Destabilizing | 0.993 | D | 0.831 | deleterious | None | None | None | None | N |
L/E | 0.9887 | likely_pathogenic | 0.9766 | pathogenic | -2.114 | Highly Destabilizing | 0.993 | D | 0.827 | deleterious | None | None | None | None | N |
L/F | 0.8993 | likely_pathogenic | 0.7701 | pathogenic | -1.181 | Destabilizing | 0.982 | D | 0.67 | neutral | D | 0.61185936 | None | None | N |
L/G | 0.9837 | likely_pathogenic | 0.9699 | pathogenic | -2.713 | Highly Destabilizing | 0.993 | D | 0.824 | deleterious | None | None | None | None | N |
L/H | 0.9923 | likely_pathogenic | 0.9769 | pathogenic | -2.294 | Highly Destabilizing | 0.999 | D | 0.802 | deleterious | D | 0.615157898 | None | None | N |
L/I | 0.2441 | likely_benign | 0.1762 | benign | -0.601 | Destabilizing | 0.1 | N | 0.341 | neutral | N | 0.46279451 | None | None | N |
L/K | 0.9884 | likely_pathogenic | 0.976 | pathogenic | -1.484 | Destabilizing | 0.993 | D | 0.795 | deleterious | None | None | None | None | N |
L/M | 0.4091 | ambiguous | 0.3374 | benign | -0.588 | Destabilizing | 0.986 | D | 0.665 | neutral | None | None | None | None | N |
L/N | 0.9905 | likely_pathogenic | 0.9792 | pathogenic | -1.811 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
L/P | 0.7304 | likely_pathogenic | 0.6137 | pathogenic | -1.105 | Destabilizing | 0.1 | N | 0.533 | neutral | N | 0.449525206 | None | None | N |
L/Q | 0.9715 | likely_pathogenic | 0.9318 | pathogenic | -1.631 | Destabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
L/R | 0.983 | likely_pathogenic | 0.9595 | pathogenic | -1.362 | Destabilizing | 0.997 | D | 0.802 | deleterious | D | 0.612586862 | None | None | N |
L/S | 0.9835 | likely_pathogenic | 0.9523 | pathogenic | -2.485 | Highly Destabilizing | 0.993 | D | 0.758 | deleterious | None | None | None | None | N |
L/T | 0.9224 | likely_pathogenic | 0.8596 | pathogenic | -2.106 | Highly Destabilizing | 0.986 | D | 0.728 | prob.delet. | None | None | None | None | N |
L/V | 0.2826 | likely_benign | 0.2158 | benign | -1.105 | Destabilizing | 0.76 | D | 0.505 | neutral | D | 0.57137898 | None | None | N |
L/W | 0.9901 | likely_pathogenic | 0.9625 | pathogenic | -1.61 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
L/Y | 0.994 | likely_pathogenic | 0.9825 | pathogenic | -1.272 | Destabilizing | 0.998 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.