Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15326 | 46201;46202;46203 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
N2AB | 13685 | 41278;41279;41280 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
N2A | 12758 | 38497;38498;38499 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
N2B | 6261 | 19006;19007;19008 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
Novex-1 | 6386 | 19381;19382;19383 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
Novex-2 | 6453 | 19582;19583;19584 | chr2:178620545;178620544;178620543 | chr2:179485272;179485271;179485270 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 1.0 | N | 0.657 | 0.341 | 0.256793551483 | gnomAD-4.0.0 | 6.84882E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.65898E-05 |
N/S | rs2058104840 | None | 0.999 | N | 0.491 | 0.452 | 0.276898752692 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs2058104840 | None | 0.999 | N | 0.491 | 0.452 | 0.276898752692 | gnomAD-4.0.0 | 6.58059E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4728E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.925 | likely_pathogenic | 0.8238 | pathogenic | -0.662 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
N/C | 0.936 | likely_pathogenic | 0.8733 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
N/D | 0.6037 | likely_pathogenic | 0.5075 | ambiguous | 0.053 | Stabilizing | 0.999 | D | 0.55 | neutral | N | 0.507216827 | None | None | N |
N/E | 0.9648 | likely_pathogenic | 0.9232 | pathogenic | 0.138 | Stabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
N/F | 0.9882 | likely_pathogenic | 0.9682 | pathogenic | -0.56 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
N/G | 0.8766 | likely_pathogenic | 0.7864 | pathogenic | -0.962 | Destabilizing | 0.999 | D | 0.495 | neutral | None | None | None | None | N |
N/H | 0.8233 | likely_pathogenic | 0.6239 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.607530484 | None | None | N |
N/I | 0.9294 | likely_pathogenic | 0.836 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | D | 0.605175548 | None | None | N |
N/K | 0.9819 | likely_pathogenic | 0.9334 | pathogenic | -0.031 | Destabilizing | 1.0 | D | 0.657 | neutral | N | 0.505191964 | None | None | N |
N/L | 0.9186 | likely_pathogenic | 0.8222 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
N/M | 0.9493 | likely_pathogenic | 0.8943 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
N/P | 0.9626 | likely_pathogenic | 0.9286 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
N/Q | 0.9598 | likely_pathogenic | 0.9033 | pathogenic | -0.514 | Destabilizing | 1.0 | D | 0.646 | neutral | None | None | None | None | N |
N/R | 0.9727 | likely_pathogenic | 0.9132 | pathogenic | -0.03 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
N/S | 0.2746 | likely_benign | 0.1921 | benign | -0.644 | Destabilizing | 0.999 | D | 0.491 | neutral | N | 0.438261818 | None | None | N |
N/T | 0.6742 | likely_pathogenic | 0.4905 | ambiguous | -0.368 | Destabilizing | 0.999 | D | 0.637 | neutral | N | 0.503435424 | None | None | N |
N/V | 0.9337 | likely_pathogenic | 0.8427 | pathogenic | -0.135 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/W | 0.9937 | likely_pathogenic | 0.9861 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
N/Y | 0.8884 | likely_pathogenic | 0.7528 | pathogenic | -0.147 | Destabilizing | 1.0 | D | 0.648 | neutral | D | 0.607662234 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.