Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15335 | 46228;46229;46230 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
N2AB | 13694 | 41305;41306;41307 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
N2A | 12767 | 38524;38525;38526 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
N2B | 6270 | 19033;19034;19035 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
Novex-1 | 6395 | 19408;19409;19410 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
Novex-2 | 6462 | 19609;19610;19611 | chr2:178620518;178620517;178620516 | chr2:179485245;179485244;179485243 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.027 | N | 0.662 | 0.093 | 0.227260227426 | gnomAD-4.0.0 | 1.59441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86402E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1371 | likely_benign | 0.1193 | benign | -1.084 | Destabilizing | 0.027 | N | 0.598 | neutral | N | 0.454218079 | None | None | N |
T/C | 0.3927 | ambiguous | 0.4537 | ambiguous | -0.816 | Destabilizing | 0.935 | D | 0.661 | neutral | None | None | None | None | N |
T/D | 0.549 | ambiguous | 0.4844 | ambiguous | -1.184 | Destabilizing | 0.555 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/E | 0.2626 | likely_benign | 0.2496 | benign | -1.022 | Destabilizing | 0.262 | N | 0.697 | prob.neutral | None | None | None | None | N |
T/F | 0.2497 | likely_benign | 0.249 | benign | -0.79 | Destabilizing | 0.235 | N | 0.7 | prob.neutral | None | None | None | None | N |
T/G | 0.3623 | ambiguous | 0.3413 | ambiguous | -1.473 | Destabilizing | 0.149 | N | 0.68 | prob.neutral | None | None | None | None | N |
T/H | 0.2673 | likely_benign | 0.2705 | benign | -1.661 | Destabilizing | 0.935 | D | 0.657 | neutral | None | None | None | None | N |
T/I | 0.2174 | likely_benign | 0.194 | benign | -0.08 | Destabilizing | 0.027 | N | 0.662 | neutral | N | 0.443902459 | None | None | N |
T/K | 0.2089 | likely_benign | 0.1915 | benign | -0.605 | Destabilizing | 0.149 | N | 0.679 | prob.neutral | None | None | None | None | N |
T/L | 0.1097 | likely_benign | 0.1046 | benign | -0.08 | Destabilizing | None | N | 0.401 | neutral | None | None | None | None | N |
T/M | 0.0793 | likely_benign | 0.0803 | benign | -0.08 | Destabilizing | 0.001 | N | 0.386 | neutral | None | None | None | None | N |
T/N | 0.1839 | likely_benign | 0.1596 | benign | -1.125 | Destabilizing | 0.484 | N | 0.705 | prob.neutral | N | 0.447652384 | None | None | N |
T/P | 0.9052 | likely_pathogenic | 0.7721 | pathogenic | -0.382 | Destabilizing | 0.741 | D | 0.701 | prob.neutral | N | 0.448839916 | None | None | N |
T/Q | 0.1727 | likely_benign | 0.1755 | benign | -0.986 | Destabilizing | 0.38 | N | 0.699 | prob.neutral | None | None | None | None | N |
T/R | 0.1664 | likely_benign | 0.1411 | benign | -0.753 | Destabilizing | 0.38 | N | 0.714 | prob.delet. | None | None | None | None | N |
T/S | 0.1487 | likely_benign | 0.1429 | benign | -1.358 | Destabilizing | 0.117 | N | 0.623 | neutral | N | 0.433099472 | None | None | N |
T/V | 0.1716 | likely_benign | 0.1768 | benign | -0.382 | Destabilizing | 0.035 | N | 0.549 | neutral | None | None | None | None | N |
T/W | 0.5144 | ambiguous | 0.5147 | ambiguous | -0.89 | Destabilizing | 0.935 | D | 0.663 | neutral | None | None | None | None | N |
T/Y | 0.2663 | likely_benign | 0.2748 | benign | -0.535 | Destabilizing | 0.555 | D | 0.689 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.