Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15340 | 46243;46244;46245 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
N2AB | 13699 | 41320;41321;41322 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
N2A | 12772 | 38539;38540;38541 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
N2B | 6275 | 19048;19049;19050 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
Novex-1 | 6400 | 19423;19424;19425 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
Novex-2 | 6467 | 19624;19625;19626 | chr2:178620503;178620502;178620501 | chr2:179485230;179485229;179485228 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1576546728 | None | 0.979 | D | 0.469 | 0.287 | 0.415820034956 | gnomAD-4.0.0 | 1.36953E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80008E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1706 | likely_benign | 0.1236 | benign | -0.431 | Destabilizing | 0.958 | D | 0.589 | neutral | D | 0.606721742 | None | None | N |
E/C | 0.8797 | likely_pathogenic | 0.8617 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/D | 0.1455 | likely_benign | 0.1174 | benign | -0.48 | Destabilizing | 0.979 | D | 0.469 | neutral | D | 0.644988015 | None | None | N |
E/F | 0.7244 | likely_pathogenic | 0.6626 | pathogenic | -0.167 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/G | 0.2851 | likely_benign | 0.1951 | benign | -0.662 | Destabilizing | 0.988 | D | 0.627 | neutral | D | 0.689304282 | None | None | N |
E/H | 0.572 | likely_pathogenic | 0.5096 | ambiguous | 0.026 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
E/I | 0.2941 | likely_benign | 0.2402 | benign | 0.154 | Stabilizing | 0.995 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/K | 0.2183 | likely_benign | 0.1542 | benign | 0.115 | Stabilizing | 0.919 | D | 0.493 | neutral | D | 0.590826421 | None | None | N |
E/L | 0.4098 | ambiguous | 0.329 | benign | 0.154 | Stabilizing | 0.991 | D | 0.698 | prob.neutral | None | None | None | None | N |
E/M | 0.4442 | ambiguous | 0.3662 | ambiguous | 0.191 | Stabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/N | 0.2773 | likely_benign | 0.2144 | benign | -0.287 | Destabilizing | 0.991 | D | 0.609 | neutral | None | None | None | None | N |
E/P | 0.3891 | ambiguous | 0.3486 | ambiguous | -0.02 | Destabilizing | 0.998 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/Q | 0.2348 | likely_benign | 0.178 | benign | -0.218 | Destabilizing | 0.958 | D | 0.554 | neutral | D | 0.606297485 | None | None | N |
E/R | 0.3585 | ambiguous | 0.2883 | benign | 0.389 | Stabilizing | 0.18 | N | 0.25 | neutral | None | None | None | None | N |
E/S | 0.2575 | likely_benign | 0.1869 | benign | -0.444 | Destabilizing | 0.968 | D | 0.578 | neutral | None | None | None | None | N |
E/T | 0.2323 | likely_benign | 0.1779 | benign | -0.254 | Destabilizing | 0.991 | D | 0.662 | neutral | None | None | None | None | N |
E/V | 0.1867 | likely_benign | 0.1485 | benign | -0.02 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | D | 0.575153155 | None | None | N |
E/W | 0.9054 | likely_pathogenic | 0.8789 | pathogenic | 0.015 | Stabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
E/Y | 0.6297 | likely_pathogenic | 0.5665 | pathogenic | 0.073 | Stabilizing | 0.998 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.