Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15342 | 46249;46250;46251 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
N2AB | 13701 | 41326;41327;41328 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
N2A | 12774 | 38545;38546;38547 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
N2B | 6277 | 19054;19055;19056 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
Novex-1 | 6402 | 19429;19430;19431 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
Novex-2 | 6469 | 19630;19631;19632 | chr2:178620497;178620496;178620495 | chr2:179485224;179485223;179485222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs2154211069 | None | 0.828 | N | 0.393 | 0.187 | 0.411265580357 | gnomAD-4.0.0 | 1.59417E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86372E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0827 | likely_benign | 0.0754 | benign | -0.568 | Destabilizing | None | N | 0.155 | neutral | N | 0.453364899 | None | None | N |
P/C | 0.365 | ambiguous | 0.3987 | ambiguous | -0.709 | Destabilizing | 0.676 | D | 0.408 | neutral | None | None | None | None | N |
P/D | 0.3293 | likely_benign | 0.3318 | benign | -0.52 | Destabilizing | 0.072 | N | 0.396 | neutral | None | None | None | None | N |
P/E | 0.2591 | likely_benign | 0.2525 | benign | -0.587 | Destabilizing | 0.072 | N | 0.339 | neutral | None | None | None | None | N |
P/F | 0.3568 | ambiguous | 0.374 | ambiguous | -0.645 | Destabilizing | 0.356 | N | 0.43 | neutral | None | None | None | None | N |
P/G | 0.207 | likely_benign | 0.202 | benign | -0.727 | Destabilizing | 0.038 | N | 0.377 | neutral | None | None | None | None | N |
P/H | 0.1634 | likely_benign | 0.154 | benign | -0.174 | Destabilizing | 0.828 | D | 0.393 | neutral | N | 0.486766999 | None | None | N |
P/I | 0.1812 | likely_benign | 0.1935 | benign | -0.273 | Destabilizing | 0.038 | N | 0.397 | neutral | None | None | None | None | N |
P/K | 0.1792 | likely_benign | 0.1751 | benign | -0.567 | Destabilizing | 0.072 | N | 0.338 | neutral | None | None | None | None | N |
P/L | 0.1114 | likely_benign | 0.1019 | benign | -0.273 | Destabilizing | 0.012 | N | 0.397 | neutral | N | 0.476948943 | None | None | N |
P/M | 0.2437 | likely_benign | 0.2439 | benign | -0.543 | Destabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
P/N | 0.2108 | likely_benign | 0.2152 | benign | -0.426 | Destabilizing | 0.214 | N | 0.415 | neutral | None | None | None | None | N |
P/Q | 0.1521 | likely_benign | 0.1389 | benign | -0.596 | Destabilizing | 0.356 | N | 0.385 | neutral | None | None | None | None | N |
P/R | 0.1429 | likely_benign | 0.1347 | benign | -0.086 | Destabilizing | 0.171 | N | 0.413 | neutral | N | 0.456172755 | None | None | N |
P/S | 0.1027 | likely_benign | 0.1 | benign | -0.759 | Destabilizing | 0.012 | N | 0.323 | neutral | N | 0.478852168 | None | None | N |
P/T | 0.0837 | likely_benign | 0.0859 | benign | -0.722 | Destabilizing | None | N | 0.149 | neutral | N | 0.350511057 | None | None | N |
P/V | 0.1426 | likely_benign | 0.1442 | benign | -0.339 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
P/W | 0.543 | ambiguous | 0.5696 | pathogenic | -0.756 | Destabilizing | 0.864 | D | 0.449 | neutral | None | None | None | None | N |
P/Y | 0.341 | ambiguous | 0.3605 | ambiguous | -0.464 | Destabilizing | 0.356 | N | 0.425 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.