Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15345 | 46258;46259;46260 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
N2AB | 13704 | 41335;41336;41337 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
N2A | 12777 | 38554;38555;38556 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
N2B | 6280 | 19063;19064;19065 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
Novex-1 | 6405 | 19438;19439;19440 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
Novex-2 | 6472 | 19639;19640;19641 | chr2:178620488;178620487;178620486 | chr2:179485215;179485214;179485213 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | None | N | 0.114 | 0.11 | 0.0884992946249 | gnomAD-4.0.0 | 1.3695E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80005E-06 | 0 | 0 |
N/S | None | None | 0.101 | N | 0.299 | 0.097 | 0.126345400529 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1994 | likely_benign | 0.1816 | benign | -0.099 | Destabilizing | 0.129 | N | 0.321 | neutral | None | None | None | None | N |
N/C | 0.2923 | likely_benign | 0.3231 | benign | 0.203 | Stabilizing | 0.983 | D | 0.291 | neutral | None | None | None | None | N |
N/D | 0.1472 | likely_benign | 0.1186 | benign | 0.079 | Stabilizing | 0.183 | N | 0.274 | neutral | N | 0.390664343 | None | None | N |
N/E | 0.2637 | likely_benign | 0.245 | benign | 0.012 | Stabilizing | 0.129 | N | 0.269 | neutral | None | None | None | None | N |
N/F | 0.5589 | ambiguous | 0.6124 | pathogenic | -0.726 | Destabilizing | 0.94 | D | 0.308 | neutral | None | None | None | None | N |
N/G | 0.2024 | likely_benign | 0.1939 | benign | -0.181 | Destabilizing | 0.228 | N | 0.307 | neutral | None | None | None | None | N |
N/H | 0.0974 | likely_benign | 0.0914 | benign | -0.24 | Destabilizing | 0.794 | D | 0.301 | neutral | N | 0.444652131 | None | None | N |
N/I | 0.2518 | likely_benign | 0.2632 | benign | 0.018 | Stabilizing | 0.794 | D | 0.349 | neutral | N | 0.454089933 | None | None | N |
N/K | 0.1346 | likely_benign | 0.1239 | benign | 0.147 | Stabilizing | None | N | 0.114 | neutral | N | 0.327643957 | None | None | N |
N/L | 0.2161 | likely_benign | 0.2348 | benign | 0.018 | Stabilizing | 0.418 | N | 0.347 | neutral | None | None | None | None | N |
N/M | 0.3504 | ambiguous | 0.3582 | ambiguous | 0.147 | Stabilizing | 0.94 | D | 0.301 | neutral | None | None | None | None | N |
N/P | 0.2856 | likely_benign | 0.2925 | benign | 0.001 | Stabilizing | 0.593 | D | 0.339 | neutral | None | None | None | None | N |
N/Q | 0.2038 | likely_benign | 0.1909 | benign | -0.207 | Destabilizing | 0.264 | N | 0.252 | neutral | None | None | None | None | N |
N/R | 0.1434 | likely_benign | 0.1684 | benign | 0.205 | Stabilizing | 0.001 | N | 0.141 | neutral | None | None | None | None | N |
N/S | 0.0801 | likely_benign | 0.0665 | benign | 0.019 | Stabilizing | 0.101 | N | 0.299 | neutral | N | 0.425794006 | None | None | N |
N/T | 0.138 | likely_benign | 0.1232 | benign | 0.062 | Stabilizing | 0.183 | N | 0.249 | neutral | N | 0.436405671 | None | None | N |
N/V | 0.2679 | likely_benign | 0.2578 | benign | 0.001 | Stabilizing | 0.418 | N | 0.389 | neutral | None | None | None | None | N |
N/W | 0.6397 | likely_pathogenic | 0.7045 | pathogenic | -0.865 | Destabilizing | 0.983 | D | 0.317 | neutral | None | None | None | None | N |
N/Y | 0.1775 | likely_benign | 0.1978 | benign | -0.534 | Destabilizing | 0.921 | D | 0.327 | neutral | N | 0.453246956 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.