Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15349 | 46270;46271;46272 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
N2AB | 13708 | 41347;41348;41349 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
N2A | 12781 | 38566;38567;38568 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
N2B | 6284 | 19075;19076;19077 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
Novex-1 | 6409 | 19450;19451;19452 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
Novex-2 | 6476 | 19651;19652;19653 | chr2:178620476;178620475;178620474 | chr2:179485203;179485202;179485201 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs977496032 | None | 1.0 | D | 0.765 | 0.553 | 0.476754456241 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Y/H | rs977496032 | None | 1.0 | D | 0.765 | 0.553 | 0.476754456241 | gnomAD-4.0.0 | 2.03037E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.2051E-06 | 0 | 3.40321E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8232 | likely_pathogenic | 0.8209 | pathogenic | -2.153 | Highly Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Y/C | 0.2216 | likely_benign | 0.2333 | benign | -1.484 | Destabilizing | 1.0 | D | 0.843 | deleterious | D | 0.600474916 | None | None | N |
Y/D | 0.872 | likely_pathogenic | 0.8798 | pathogenic | -2.51 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.601508465 | None | None | N |
Y/E | 0.9379 | likely_pathogenic | 0.9457 | pathogenic | -2.313 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/F | 0.1817 | likely_benign | 0.1833 | benign | -0.798 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.507699608 | None | None | N |
Y/G | 0.7391 | likely_pathogenic | 0.7482 | pathogenic | -2.531 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/H | 0.5151 | ambiguous | 0.5111 | ambiguous | -1.353 | Destabilizing | 1.0 | D | 0.765 | deleterious | D | 0.600474916 | None | None | N |
Y/I | 0.7083 | likely_pathogenic | 0.702 | pathogenic | -0.921 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Y/K | 0.9065 | likely_pathogenic | 0.906 | pathogenic | -1.838 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/L | 0.5835 | likely_pathogenic | 0.5956 | pathogenic | -0.921 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | N |
Y/M | 0.7965 | likely_pathogenic | 0.8106 | pathogenic | -0.839 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Y/N | 0.6242 | likely_pathogenic | 0.6239 | pathogenic | -2.648 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.600474916 | None | None | N |
Y/P | 0.9681 | likely_pathogenic | 0.9647 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
Y/Q | 0.8456 | likely_pathogenic | 0.8567 | pathogenic | -2.33 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
Y/R | 0.8001 | likely_pathogenic | 0.7989 | pathogenic | -1.868 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
Y/S | 0.504 | ambiguous | 0.492 | ambiguous | -2.995 | Highly Destabilizing | 1.0 | D | 0.823 | deleterious | N | 0.501938569 | None | None | N |
Y/T | 0.7756 | likely_pathogenic | 0.7773 | pathogenic | -2.672 | Highly Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
Y/V | 0.5937 | likely_pathogenic | 0.6017 | pathogenic | -1.341 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
Y/W | 0.5507 | ambiguous | 0.5545 | ambiguous | -0.257 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.