Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15350 | 46273;46274;46275 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
N2AB | 13709 | 41350;41351;41352 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
N2A | 12782 | 38569;38570;38571 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
N2B | 6285 | 19078;19079;19080 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
Novex-1 | 6410 | 19453;19454;19455 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
Novex-2 | 6477 | 19654;19655;19656 | chr2:178620473;178620472;178620471 | chr2:179485200;179485199;179485198 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.896 | D | 0.56 | 0.34 | 0.38342384377 | gnomAD-4.0.0 | 3.42373E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.50014E-06 | 0 | 0 |
R/K | None | None | 0.011 | N | 0.165 | 0.203 | 0.284150004643 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4011 | ambiguous | 0.3586 | ambiguous | -0.063 | Destabilizing | 0.919 | D | 0.567 | neutral | None | None | None | None | N |
R/C | 0.2617 | likely_benign | 0.2309 | benign | -0.168 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
R/D | 0.6904 | likely_pathogenic | 0.6606 | pathogenic | 0.039 | Stabilizing | 0.976 | D | 0.591 | neutral | None | None | None | None | N |
R/E | 0.3965 | ambiguous | 0.361 | ambiguous | 0.114 | Stabilizing | 0.851 | D | 0.516 | neutral | None | None | None | None | N |
R/F | 0.5759 | likely_pathogenic | 0.548 | ambiguous | -0.244 | Destabilizing | 0.996 | D | 0.672 | neutral | None | None | None | None | N |
R/G | 0.3306 | likely_benign | 0.2989 | benign | -0.276 | Destabilizing | 0.896 | D | 0.56 | neutral | D | 0.530081428 | None | None | N |
R/H | 0.1215 | likely_benign | 0.0979 | benign | -0.777 | Destabilizing | 0.996 | D | 0.55 | neutral | None | None | None | None | N |
R/I | 0.2616 | likely_benign | 0.2199 | benign | 0.468 | Stabilizing | 0.984 | D | 0.685 | prob.neutral | N | 0.490398531 | None | None | N |
R/K | 0.0989 | likely_benign | 0.0917 | benign | -0.054 | Destabilizing | 0.011 | N | 0.165 | neutral | N | 0.481147208 | None | None | N |
R/L | 0.3001 | likely_benign | 0.2596 | benign | 0.468 | Stabilizing | 0.919 | D | 0.56 | neutral | None | None | None | None | N |
R/M | 0.2767 | likely_benign | 0.249 | benign | 0.036 | Stabilizing | 0.999 | D | 0.619 | neutral | None | None | None | None | N |
R/N | 0.5568 | ambiguous | 0.5463 | ambiguous | 0.212 | Stabilizing | 0.976 | D | 0.545 | neutral | None | None | None | None | N |
R/P | 0.9437 | likely_pathogenic | 0.934 | pathogenic | 0.312 | Stabilizing | 0.988 | D | 0.672 | neutral | None | None | None | None | N |
R/Q | 0.1276 | likely_benign | 0.1054 | benign | 0.101 | Stabilizing | 0.976 | D | 0.579 | neutral | None | None | None | None | N |
R/S | 0.4323 | ambiguous | 0.3946 | ambiguous | -0.216 | Destabilizing | 0.896 | D | 0.587 | neutral | N | 0.502936284 | None | None | N |
R/T | 0.2012 | likely_benign | 0.18 | benign | 0.005 | Stabilizing | 0.896 | D | 0.586 | neutral | N | 0.491827498 | None | None | N |
R/V | 0.351 | ambiguous | 0.2907 | benign | 0.312 | Stabilizing | 0.988 | D | 0.661 | neutral | None | None | None | None | N |
R/W | 0.2418 | likely_benign | 0.2351 | benign | -0.251 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | None | None | None | None | N |
R/Y | 0.4905 | ambiguous | 0.4718 | ambiguous | 0.156 | Stabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.