Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15362 | 46309;46310;46311 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
N2AB | 13721 | 41386;41387;41388 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
N2A | 12794 | 38605;38606;38607 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
N2B | 6297 | 19114;19115;19116 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
Novex-1 | 6422 | 19489;19490;19491 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
Novex-2 | 6489 | 19690;19691;19692 | chr2:178620437;178620436;178620435 | chr2:179485164;179485163;179485162 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs2058092096 | None | 0.17 | N | 0.316 | 0.06 | 0.0920862733494 | gnomAD-4.0.0 | 1.59442E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86443E-06 | 0 | 0 |
D/G | rs779619831 | -0.39 | 0.885 | N | 0.535 | 0.292 | 0.144782658237 | gnomAD-4.0.0 | 1.59441E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43451E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4144 | ambiguous | 0.4784 | ambiguous | -0.369 | Destabilizing | 0.939 | D | 0.559 | neutral | D | 0.522869181 | None | None | N |
D/C | 0.8988 | likely_pathogenic | 0.9234 | pathogenic | 0.075 | Stabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
D/E | 0.3039 | likely_benign | 0.3866 | ambiguous | -0.389 | Destabilizing | 0.17 | N | 0.316 | neutral | N | 0.453478943 | None | None | N |
D/F | 0.8071 | likely_pathogenic | 0.8453 | pathogenic | -0.441 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
D/G | 0.3075 | likely_benign | 0.3767 | ambiguous | -0.588 | Destabilizing | 0.885 | D | 0.535 | neutral | N | 0.444820515 | None | None | N |
D/H | 0.5899 | likely_pathogenic | 0.6599 | pathogenic | -0.578 | Destabilizing | 0.998 | D | 0.676 | prob.neutral | N | 0.442025166 | None | None | N |
D/I | 0.7575 | likely_pathogenic | 0.804 | pathogenic | 0.164 | Stabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
D/K | 0.6877 | likely_pathogenic | 0.7473 | pathogenic | 0.075 | Stabilizing | 0.953 | D | 0.581 | neutral | None | None | None | None | N |
D/L | 0.7272 | likely_pathogenic | 0.779 | pathogenic | 0.164 | Stabilizing | 0.993 | D | 0.751 | deleterious | None | None | None | None | N |
D/M | 0.8799 | likely_pathogenic | 0.9147 | pathogenic | 0.497 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
D/N | 0.1433 | likely_benign | 0.1788 | benign | -0.113 | Destabilizing | 0.1 | N | 0.302 | neutral | N | 0.440154992 | None | None | N |
D/P | 0.9554 | likely_pathogenic | 0.9642 | pathogenic | 0.009 | Stabilizing | 0.998 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/Q | 0.6383 | likely_pathogenic | 0.7102 | pathogenic | -0.082 | Destabilizing | 0.986 | D | 0.658 | neutral | None | None | None | None | N |
D/R | 0.7067 | likely_pathogenic | 0.7596 | pathogenic | 0.131 | Stabilizing | 0.986 | D | 0.721 | prob.delet. | None | None | None | None | N |
D/S | 0.279 | likely_benign | 0.3401 | ambiguous | -0.263 | Destabilizing | 0.91 | D | 0.495 | neutral | None | None | None | None | N |
D/T | 0.5693 | likely_pathogenic | 0.6322 | pathogenic | -0.099 | Destabilizing | 0.986 | D | 0.594 | neutral | None | None | None | None | N |
D/V | 0.5482 | ambiguous | 0.595 | pathogenic | 0.009 | Stabilizing | 0.991 | D | 0.753 | deleterious | D | 0.568360247 | None | None | N |
D/W | 0.959 | likely_pathogenic | 0.9689 | pathogenic | -0.359 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
D/Y | 0.3479 | ambiguous | 0.3712 | ambiguous | -0.231 | Destabilizing | 0.999 | D | 0.753 | deleterious | D | 0.568192344 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.