Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15373 | 46342;46343;46344 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
N2AB | 13732 | 41419;41420;41421 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
N2A | 12805 | 38638;38639;38640 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
N2B | 6308 | 19147;19148;19149 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
Novex-1 | 6433 | 19522;19523;19524 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
Novex-2 | 6500 | 19723;19724;19725 | chr2:178620404;178620403;178620402 | chr2:179485131;179485130;179485129 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs2058089139 | None | 0.998 | D | 0.853 | 0.483 | 0.75824790645 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.57E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/D | rs2058089139 | None | 0.998 | D | 0.853 | 0.483 | 0.75824790645 | gnomAD-4.0.0 | 6.58302E-06 | None | None | None | None | N | None | 0 | 6.56858E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4952 | ambiguous | 0.4865 | ambiguous | -1.846 | Destabilizing | 0.333 | N | 0.4 | neutral | N | 0.455867241 | None | None | N |
V/C | 0.8579 | likely_pathogenic | 0.8774 | pathogenic | -1.293 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
V/D | 0.9956 | likely_pathogenic | 0.994 | pathogenic | -2.379 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | D | 0.554560137 | None | None | N |
V/E | 0.9893 | likely_pathogenic | 0.9874 | pathogenic | -2.125 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/F | 0.6846 | likely_pathogenic | 0.7223 | pathogenic | -0.985 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.450486839 | None | None | N |
V/G | 0.7842 | likely_pathogenic | 0.7717 | pathogenic | -2.415 | Highly Destabilizing | 0.989 | D | 0.806 | deleterious | D | 0.55438433 | None | None | N |
V/H | 0.9953 | likely_pathogenic | 0.9955 | pathogenic | -2.25 | Highly Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
V/I | 0.1474 | likely_benign | 0.1535 | benign | -0.243 | Destabilizing | 0.987 | D | 0.53 | neutral | N | 0.448682939 | None | None | N |
V/K | 0.9918 | likely_pathogenic | 0.9905 | pathogenic | -1.321 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
V/L | 0.4433 | ambiguous | 0.5114 | ambiguous | -0.243 | Destabilizing | 0.973 | D | 0.635 | neutral | N | 0.461603962 | None | None | N |
V/M | 0.5639 | ambiguous | 0.6112 | pathogenic | -0.393 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
V/N | 0.9845 | likely_pathogenic | 0.9793 | pathogenic | -1.728 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9881 | likely_pathogenic | 0.9897 | pathogenic | -0.751 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
V/Q | 0.9822 | likely_pathogenic | 0.9808 | pathogenic | -1.492 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
V/R | 0.9806 | likely_pathogenic | 0.9779 | pathogenic | -1.348 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
V/S | 0.904 | likely_pathogenic | 0.8831 | pathogenic | -2.353 | Highly Destabilizing | 0.983 | D | 0.79 | deleterious | None | None | None | None | N |
V/T | 0.7803 | likely_pathogenic | 0.7697 | pathogenic | -1.948 | Destabilizing | 0.992 | D | 0.657 | neutral | None | None | None | None | N |
V/W | 0.9971 | likely_pathogenic | 0.9978 | pathogenic | -1.543 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/Y | 0.9793 | likely_pathogenic | 0.9802 | pathogenic | -1.118 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.