Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15386 | 46381;46382;46383 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
N2AB | 13745 | 41458;41459;41460 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
N2A | 12818 | 38677;38678;38679 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
N2B | 6321 | 19186;19187;19188 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
Novex-1 | 6446 | 19561;19562;19563 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
Novex-2 | 6513 | 19762;19763;19764 | chr2:178620365;178620364;178620363 | chr2:179485092;179485091;179485090 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.999 | N | 0.602 | 0.454 | 0.619546946635 | gnomAD-4.0.0 | 1.5998E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03841E-05 |
I/V | rs879033914 | None | 0.985 | N | 0.288 | 0.217 | 0.365317461125 | gnomAD-4.0.0 | 2.05735E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70267E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9594 | likely_pathogenic | 0.9646 | pathogenic | -2.285 | Highly Destabilizing | 0.998 | D | 0.443 | neutral | None | None | None | None | N |
I/C | 0.9715 | likely_pathogenic | 0.9728 | pathogenic | -1.397 | Destabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | N |
I/D | 0.9958 | likely_pathogenic | 0.9966 | pathogenic | -2.019 | Highly Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/E | 0.9907 | likely_pathogenic | 0.992 | pathogenic | -1.855 | Destabilizing | 0.999 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/F | 0.802 | likely_pathogenic | 0.8217 | pathogenic | -1.305 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | D | 0.53962181 | None | None | N |
I/G | 0.9901 | likely_pathogenic | 0.9911 | pathogenic | -2.77 | Highly Destabilizing | 0.999 | D | 0.726 | prob.delet. | None | None | None | None | N |
I/H | 0.989 | likely_pathogenic | 0.9902 | pathogenic | -2.034 | Highly Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
I/K | 0.9735 | likely_pathogenic | 0.9751 | pathogenic | -1.574 | Destabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
I/L | 0.3977 | ambiguous | 0.408 | ambiguous | -0.923 | Destabilizing | 0.985 | D | 0.288 | neutral | N | 0.449685704 | None | None | N |
I/M | 0.4986 | ambiguous | 0.516 | ambiguous | -0.81 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | D | 0.540385868 | None | None | N |
I/N | 0.9359 | likely_pathogenic | 0.9475 | pathogenic | -1.686 | Destabilizing | 0.999 | D | 0.748 | deleterious | D | 0.541517431 | None | None | N |
I/P | 0.9859 | likely_pathogenic | 0.9879 | pathogenic | -1.354 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
I/Q | 0.9817 | likely_pathogenic | 0.9836 | pathogenic | -1.652 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
I/R | 0.9612 | likely_pathogenic | 0.9622 | pathogenic | -1.194 | Destabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
I/S | 0.9567 | likely_pathogenic | 0.9632 | pathogenic | -2.427 | Highly Destabilizing | 0.999 | D | 0.673 | neutral | D | 0.541517431 | None | None | N |
I/T | 0.9357 | likely_pathogenic | 0.9399 | pathogenic | -2.132 | Highly Destabilizing | 0.999 | D | 0.602 | neutral | N | 0.496792983 | None | None | N |
I/V | 0.2076 | likely_benign | 0.186 | benign | -1.354 | Destabilizing | 0.985 | D | 0.288 | neutral | N | 0.379952639 | None | None | N |
I/W | 0.9938 | likely_pathogenic | 0.9944 | pathogenic | -1.575 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
I/Y | 0.9701 | likely_pathogenic | 0.9748 | pathogenic | -1.308 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.