Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15396 | 46411;46412;46413 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
N2AB | 13755 | 41488;41489;41490 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
N2A | 12828 | 38707;38708;38709 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
N2B | 6331 | 19216;19217;19218 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
Novex-1 | 6456 | 19591;19592;19593 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
Novex-2 | 6523 | 19792;19793;19794 | chr2:178620335;178620334;178620333 | chr2:179485062;179485061;179485060 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | None | None | 0.004 | N | 0.371 | 0.256 | 0.267755039894 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4133 | ambiguous | 0.5144 | ambiguous | -0.25 | Destabilizing | 0.25 | N | 0.487 | neutral | None | None | None | None | N |
H/C | 0.4354 | ambiguous | 0.5264 | ambiguous | 0.346 | Stabilizing | 0.992 | D | 0.498 | neutral | None | None | None | None | N |
H/D | 0.3974 | ambiguous | 0.4482 | ambiguous | 0.097 | Stabilizing | 0.379 | N | 0.527 | neutral | N | 0.506002915 | None | None | N |
H/E | 0.457 | ambiguous | 0.5558 | ambiguous | 0.157 | Stabilizing | 0.25 | N | 0.492 | neutral | None | None | None | None | N |
H/F | 0.41 | ambiguous | 0.4934 | ambiguous | 0.684 | Stabilizing | 0.972 | D | 0.518 | neutral | None | None | None | None | N |
H/G | 0.4969 | ambiguous | 0.5966 | pathogenic | -0.573 | Destabilizing | 0.447 | N | 0.503 | neutral | None | None | None | None | N |
H/I | 0.4992 | ambiguous | 0.616 | pathogenic | 0.604 | Stabilizing | 0.92 | D | 0.503 | neutral | None | None | None | None | N |
H/K | 0.3327 | likely_benign | 0.4177 | ambiguous | -0.082 | Destabilizing | 0.447 | N | 0.526 | neutral | None | None | None | None | N |
H/L | 0.2024 | likely_benign | 0.2595 | benign | 0.604 | Stabilizing | 0.549 | D | 0.521 | neutral | N | 0.470419325 | None | None | N |
H/M | 0.5251 | ambiguous | 0.6413 | pathogenic | 0.394 | Stabilizing | 0.972 | D | 0.479 | neutral | None | None | None | None | N |
H/N | 0.155 | likely_benign | 0.1757 | benign | -0.106 | Destabilizing | 0.004 | N | 0.175 | neutral | N | 0.494673186 | None | None | N |
H/P | 0.179 | likely_benign | 0.1737 | benign | 0.344 | Stabilizing | 0.004 | N | 0.371 | neutral | N | 0.435998329 | None | None | N |
H/Q | 0.2752 | likely_benign | 0.3608 | ambiguous | 0.041 | Stabilizing | 0.045 | N | 0.149 | neutral | N | 0.466143278 | None | None | N |
H/R | 0.1982 | likely_benign | 0.259 | benign | -0.546 | Destabilizing | 0.549 | D | 0.483 | neutral | N | 0.487232408 | None | None | N |
H/S | 0.3531 | ambiguous | 0.4359 | ambiguous | -0.187 | Destabilizing | 0.447 | N | 0.53 | neutral | None | None | None | None | N |
H/T | 0.4065 | ambiguous | 0.552 | ambiguous | -0.02 | Destabilizing | 0.617 | D | 0.493 | neutral | None | None | None | None | N |
H/V | 0.4087 | ambiguous | 0.5324 | ambiguous | 0.344 | Stabilizing | 0.617 | D | 0.517 | neutral | None | None | None | None | N |
H/W | 0.5809 | likely_pathogenic | 0.6513 | pathogenic | 0.886 | Stabilizing | 0.992 | D | 0.499 | neutral | None | None | None | None | N |
H/Y | 0.1557 | likely_benign | 0.1819 | benign | 1.062 | Stabilizing | 0.963 | D | 0.492 | neutral | N | 0.508190801 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.