Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15398 | 46417;46418;46419 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
N2AB | 13757 | 41494;41495;41496 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
N2A | 12830 | 38713;38714;38715 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
N2B | 6333 | 19222;19223;19224 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
Novex-1 | 6458 | 19597;19598;19599 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
Novex-2 | 6525 | 19798;19799;19800 | chr2:178620329;178620328;178620327 | chr2:179485056;179485055;179485054 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1405135300 | None | 0.003 | N | 0.117 | 0.172 | 0.240491677333 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1405135300 | None | 0.003 | N | 0.117 | 0.172 | 0.240491677333 | gnomAD-4.0.0 | 2.62404E-06 | None | None | None | None | N | None | 1.7066E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.91562E-05 |
E/V | rs978970349 | None | 0.101 | N | 0.459 | 0.192 | 0.394685799254 | gnomAD-2.1.1 | 4.23E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.28E-06 | 0 |
E/V | rs978970349 | None | 0.101 | N | 0.459 | 0.192 | 0.394685799254 | gnomAD-4.0.0 | 1.47524E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.64849E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1561 | likely_benign | 0.2022 | benign | -0.312 | Destabilizing | 0.047 | N | 0.261 | neutral | N | 0.502657247 | None | None | N |
E/C | 0.8183 | likely_pathogenic | 0.8736 | pathogenic | -0.126 | Destabilizing | 0.983 | D | 0.515 | neutral | None | None | None | None | N |
E/D | 0.2207 | likely_benign | 0.264 | benign | -0.388 | Destabilizing | 0.183 | N | 0.296 | neutral | N | 0.511589718 | None | None | N |
E/F | 0.7673 | likely_pathogenic | 0.8344 | pathogenic | -0.082 | Destabilizing | 0.716 | D | 0.553 | neutral | None | None | None | None | N |
E/G | 0.2048 | likely_benign | 0.2453 | benign | -0.531 | Destabilizing | 0.001 | N | 0.256 | neutral | D | 0.543664291 | None | None | N |
E/H | 0.3907 | ambiguous | 0.4619 | ambiguous | 0.183 | Stabilizing | 0.836 | D | 0.417 | neutral | None | None | None | None | N |
E/I | 0.3777 | ambiguous | 0.4814 | ambiguous | 0.234 | Stabilizing | 0.264 | N | 0.531 | neutral | None | None | None | None | N |
E/K | 0.1062 | likely_benign | 0.1325 | benign | 0.298 | Stabilizing | 0.003 | N | 0.117 | neutral | N | 0.450956178 | None | None | N |
E/L | 0.35 | ambiguous | 0.4551 | ambiguous | 0.234 | Stabilizing | 0.129 | N | 0.411 | neutral | None | None | None | None | N |
E/M | 0.4457 | ambiguous | 0.5501 | ambiguous | 0.222 | Stabilizing | 0.061 | N | 0.305 | neutral | None | None | None | None | N |
E/N | 0.2958 | likely_benign | 0.4037 | ambiguous | -0.086 | Destabilizing | 0.228 | N | 0.358 | neutral | None | None | None | None | N |
E/P | 0.7372 | likely_pathogenic | 0.8523 | pathogenic | 0.073 | Stabilizing | 0.593 | D | 0.436 | neutral | None | None | None | None | N |
E/Q | 0.0881 | likely_benign | 0.114 | benign | -0.03 | Destabilizing | 0.003 | N | 0.135 | neutral | N | 0.482006266 | None | None | N |
E/R | 0.1525 | likely_benign | 0.1747 | benign | 0.564 | Stabilizing | 0.129 | N | 0.351 | neutral | None | None | None | None | N |
E/S | 0.2141 | likely_benign | 0.2822 | benign | -0.246 | Destabilizing | 0.012 | N | 0.151 | neutral | None | None | None | None | N |
E/T | 0.2126 | likely_benign | 0.2917 | benign | -0.064 | Destabilizing | 0.129 | N | 0.413 | neutral | None | None | None | None | N |
E/V | 0.2304 | likely_benign | 0.2895 | benign | 0.073 | Stabilizing | 0.101 | N | 0.459 | neutral | N | 0.512994744 | None | None | N |
E/W | 0.8806 | likely_pathogenic | 0.9113 | pathogenic | 0.089 | Stabilizing | 0.983 | D | 0.535 | neutral | None | None | None | None | N |
E/Y | 0.6562 | likely_pathogenic | 0.7197 | pathogenic | 0.171 | Stabilizing | 0.94 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.