Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1540 | 4843;4844;4845 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
N2AB | 1540 | 4843;4844;4845 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
N2A | 1540 | 4843;4844;4845 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
N2B | 1494 | 4705;4706;4707 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
Novex-1 | 1494 | 4705;4706;4707 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
Novex-2 | 1494 | 4705;4706;4707 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
Novex-3 | 1540 | 4843;4844;4845 | chr2:178777447;178777446;178777445 | chr2:179642174;179642173;179642172 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs2092352541 | None | 0.124 | D | 0.631 | 0.302 | 0.658222036576 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0876 | likely_benign | 0.0884 | benign | -0.528 | Destabilizing | 0.055 | N | 0.509 | neutral | D | 0.53660314 | None | None | I |
S/C | 0.1712 | likely_benign | 0.1709 | benign | -0.403 | Destabilizing | 0.909 | D | 0.664 | neutral | None | None | None | None | I |
S/D | 0.5702 | likely_pathogenic | 0.5851 | pathogenic | 0.674 | Stabilizing | 0.272 | N | 0.507 | neutral | None | None | None | None | I |
S/E | 0.5865 | likely_pathogenic | 0.5918 | pathogenic | 0.65 | Stabilizing | 0.272 | N | 0.493 | neutral | None | None | None | None | I |
S/F | 0.2848 | likely_benign | 0.2887 | benign | -0.917 | Destabilizing | 0.726 | D | 0.715 | prob.delet. | None | None | None | None | I |
S/G | 0.1654 | likely_benign | 0.1724 | benign | -0.717 | Destabilizing | 0.272 | N | 0.489 | neutral | None | None | None | None | I |
S/H | 0.4093 | ambiguous | 0.4152 | ambiguous | -1.056 | Destabilizing | 0.968 | D | 0.658 | neutral | None | None | None | None | I |
S/I | 0.2292 | likely_benign | 0.2275 | benign | -0.145 | Destabilizing | 0.396 | N | 0.708 | prob.delet. | None | None | None | None | I |
S/K | 0.7228 | likely_pathogenic | 0.7326 | pathogenic | -0.224 | Destabilizing | 0.272 | N | 0.497 | neutral | None | None | None | None | I |
S/L | 0.1515 | likely_benign | 0.1527 | benign | -0.145 | Destabilizing | 0.124 | N | 0.631 | neutral | D | 0.545835267 | None | None | I |
S/M | 0.2215 | likely_benign | 0.2217 | benign | -0.15 | Destabilizing | 0.909 | D | 0.662 | neutral | None | None | None | None | I |
S/N | 0.1826 | likely_benign | 0.1862 | benign | -0.163 | Destabilizing | 0.272 | N | 0.525 | neutral | None | None | None | None | I |
S/P | 0.8572 | likely_pathogenic | 0.8926 | pathogenic | -0.241 | Destabilizing | 0.001 | N | 0.383 | neutral | D | 0.718850538 | None | None | I |
S/Q | 0.5168 | ambiguous | 0.5294 | ambiguous | -0.255 | Destabilizing | 0.726 | D | 0.542 | neutral | None | None | None | None | I |
S/R | 0.6259 | likely_pathogenic | 0.6447 | pathogenic | -0.169 | Destabilizing | 0.567 | D | 0.681 | prob.neutral | None | None | None | None | I |
S/T | 0.0724 | likely_benign | 0.0711 | benign | -0.274 | Destabilizing | None | N | 0.199 | neutral | N | 0.483356704 | None | None | I |
S/V | 0.1922 | likely_benign | 0.1911 | benign | -0.241 | Destabilizing | 0.157 | N | 0.631 | neutral | None | None | None | None | I |
S/W | 0.5482 | ambiguous | 0.5564 | ambiguous | -0.903 | Destabilizing | 0.968 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/Y | 0.2981 | likely_benign | 0.3017 | benign | -0.596 | Destabilizing | 0.726 | D | 0.716 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.