Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15404 | 46435;46436;46437 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
N2AB | 13763 | 41512;41513;41514 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
N2A | 12836 | 38731;38732;38733 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
N2B | 6339 | 19240;19241;19242 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
Novex-1 | 6464 | 19615;19616;19617 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
Novex-2 | 6531 | 19816;19817;19818 | chr2:178620311;178620310;178620309 | chr2:179485038;179485037;179485036 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs878854311 | None | 1.0 | D | 0.672 | 0.729 | 0.665719803998 | gnomAD-4.0.0 | 1.68363E-06 | None | None | None | None | N | None | 6.01106E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | None | None | 0.999 | D | 0.63 | 0.521 | 0.503002171853 | gnomAD-4.0.0 | 1.67923E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.00589E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5165 | ambiguous | 0.6221 | pathogenic | -0.991 | Destabilizing | 0.999 | D | 0.657 | neutral | D | 0.558775783 | None | None | N |
E/C | 0.9852 | likely_pathogenic | 0.9909 | pathogenic | -0.443 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/D | 0.905 | likely_pathogenic | 0.9471 | pathogenic | -0.789 | Destabilizing | 0.999 | D | 0.463 | neutral | D | 0.594233147 | None | None | N |
E/F | 0.9921 | likely_pathogenic | 0.9963 | pathogenic | -0.455 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
E/G | 0.8245 | likely_pathogenic | 0.8902 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.672 | neutral | D | 0.724769076 | None | None | N |
E/H | 0.9814 | likely_pathogenic | 0.9902 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/I | 0.8854 | likely_pathogenic | 0.9154 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
E/K | 0.8392 | likely_pathogenic | 0.8931 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.63 | neutral | D | 0.586941346 | None | None | N |
E/L | 0.9319 | likely_pathogenic | 0.959 | pathogenic | -0.166 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
E/M | 0.9078 | likely_pathogenic | 0.9467 | pathogenic | 0.189 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/N | 0.9464 | likely_pathogenic | 0.9723 | pathogenic | -0.847 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
E/P | 0.9286 | likely_pathogenic | 0.9463 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/Q | 0.5739 | likely_pathogenic | 0.7004 | pathogenic | -0.746 | Destabilizing | 1.0 | D | 0.645 | neutral | D | 0.623769681 | None | None | N |
E/R | 0.8909 | likely_pathogenic | 0.9292 | pathogenic | 0.04 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
E/S | 0.8348 | likely_pathogenic | 0.9051 | pathogenic | -1.078 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/T | 0.8715 | likely_pathogenic | 0.9198 | pathogenic | -0.815 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
E/V | 0.7534 | likely_pathogenic | 0.8111 | pathogenic | -0.421 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | D | 0.532847594 | None | None | N |
E/W | 0.9985 | likely_pathogenic | 0.9993 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
E/Y | 0.9859 | likely_pathogenic | 0.9933 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.