Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15405 | 46438;46439;46440 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
N2AB | 13764 | 41515;41516;41517 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
N2A | 12837 | 38734;38735;38736 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
N2B | 6340 | 19243;19244;19245 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
Novex-1 | 6465 | 19618;19619;19620 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
Novex-2 | 6532 | 19819;19820;19821 | chr2:178620308;178620307;178620306 | chr2:179485035;179485034;179485033 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs779560487 | None | 0.999 | N | 0.653 | 0.508 | 0.283761946502 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 2.88517E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
F/L | rs779560487 | None | 0.999 | N | 0.653 | 0.508 | 0.283761946502 | gnomAD-4.0.0 | 6.58415E-06 | None | None | None | None | N | None | 0 | 0 | None | 2.88517E-04 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8136 | likely_pathogenic | 0.8017 | pathogenic | -1.092 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
F/C | 0.7311 | likely_pathogenic | 0.6881 | pathogenic | -0.132 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.504105685 | None | None | N |
F/D | 0.8241 | likely_pathogenic | 0.8213 | pathogenic | 0.409 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
F/E | 0.9025 | likely_pathogenic | 0.8933 | pathogenic | 0.372 | Stabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/G | 0.7317 | likely_pathogenic | 0.6857 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
F/H | 0.7567 | likely_pathogenic | 0.7573 | pathogenic | 0.073 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
F/I | 0.8154 | likely_pathogenic | 0.8177 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.503896204 | None | None | N |
F/K | 0.9069 | likely_pathogenic | 0.882 | pathogenic | -0.06 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
F/L | 0.9537 | likely_pathogenic | 0.95 | pathogenic | -0.564 | Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.504987561 | None | None | N |
F/M | 0.7625 | likely_pathogenic | 0.7402 | pathogenic | -0.282 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
F/N | 0.6129 | likely_pathogenic | 0.6067 | pathogenic | 0.085 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
F/P | 0.9966 | likely_pathogenic | 0.9965 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
F/Q | 0.8966 | likely_pathogenic | 0.8822 | pathogenic | -0.064 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
F/R | 0.8697 | likely_pathogenic | 0.8447 | pathogenic | 0.514 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/S | 0.6519 | likely_pathogenic | 0.651 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | N | 0.472926702 | None | None | N |
F/T | 0.7569 | likely_pathogenic | 0.7237 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/V | 0.772 | likely_pathogenic | 0.7652 | pathogenic | -0.72 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | N | 0.505400675 | None | None | N |
F/W | 0.6192 | likely_pathogenic | 0.6289 | pathogenic | -0.497 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
F/Y | 0.1918 | likely_benign | 0.2014 | benign | -0.423 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.505400675 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.