Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15406 | 46441;46442;46443 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
N2AB | 13765 | 41518;41519;41520 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
N2A | 12838 | 38737;38738;38739 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
N2B | 6341 | 19246;19247;19248 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
Novex-1 | 6466 | 19621;19622;19623 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
Novex-2 | 6533 | 19822;19823;19824 | chr2:178620305;178620304;178620303 | chr2:179485032;179485031;179485030 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs2058075487 | None | 0.989 | N | 0.443 | 0.446 | 0.447901950027 | gnomAD-4.0.0 | 2.8165E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.75031E-06 | 0 | 1.71086E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4005 | ambiguous | 0.333 | benign | -0.311 | Destabilizing | 0.939 | D | 0.501 | neutral | N | 0.483871322 | None | None | N |
D/C | 0.9068 | likely_pathogenic | 0.8709 | pathogenic | 0.147 | Stabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
D/E | 0.2514 | likely_benign | 0.1963 | benign | -0.591 | Destabilizing | 0.02 | N | 0.241 | neutral | N | 0.351267183 | None | None | N |
D/F | 0.9241 | likely_pathogenic | 0.8789 | pathogenic | -0.554 | Destabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/G | 0.4461 | ambiguous | 0.3647 | ambiguous | -0.534 | Destabilizing | 0.969 | D | 0.448 | neutral | N | 0.489511107 | None | None | N |
D/H | 0.642 | likely_pathogenic | 0.5355 | ambiguous | -0.803 | Destabilizing | 0.999 | D | 0.51 | neutral | N | 0.520795136 | None | None | N |
D/I | 0.8339 | likely_pathogenic | 0.7538 | pathogenic | 0.234 | Stabilizing | 0.993 | D | 0.7 | prob.neutral | None | None | None | None | N |
D/K | 0.6512 | likely_pathogenic | 0.5217 | ambiguous | 0.006 | Stabilizing | 0.91 | D | 0.425 | neutral | None | None | None | None | N |
D/L | 0.7718 | likely_pathogenic | 0.6823 | pathogenic | 0.234 | Stabilizing | 0.986 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/M | 0.8865 | likely_pathogenic | 0.838 | pathogenic | 0.648 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/N | 0.2558 | likely_benign | 0.2019 | benign | -0.157 | Destabilizing | 0.989 | D | 0.443 | neutral | N | 0.517697495 | None | None | N |
D/P | 0.9865 | likely_pathogenic | 0.985 | pathogenic | 0.076 | Stabilizing | 0.993 | D | 0.502 | neutral | None | None | None | None | N |
D/Q | 0.507 | ambiguous | 0.4075 | ambiguous | -0.13 | Destabilizing | 0.973 | D | 0.435 | neutral | None | None | None | None | N |
D/R | 0.6691 | likely_pathogenic | 0.5418 | ambiguous | -0.009 | Destabilizing | 0.986 | D | 0.619 | neutral | None | None | None | None | N |
D/S | 0.2755 | likely_benign | 0.2195 | benign | -0.291 | Destabilizing | 0.953 | D | 0.403 | neutral | None | None | None | None | N |
D/T | 0.5655 | likely_pathogenic | 0.4642 | ambiguous | -0.127 | Destabilizing | 0.986 | D | 0.448 | neutral | None | None | None | None | N |
D/V | 0.6408 | likely_pathogenic | 0.5399 | ambiguous | 0.076 | Stabilizing | 0.991 | D | 0.683 | prob.neutral | D | 0.543787967 | None | None | N |
D/W | 0.9749 | likely_pathogenic | 0.9612 | pathogenic | -0.547 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/Y | 0.6419 | likely_pathogenic | 0.5549 | ambiguous | -0.362 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | D | 0.546337334 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.