Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15410 | 46453;46454;46455 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
N2AB | 13769 | 41530;41531;41532 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
N2A | 12842 | 38749;38750;38751 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
N2B | 6345 | 19258;19259;19260 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
Novex-1 | 6470 | 19633;19634;19635 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
Novex-2 | 6537 | 19834;19835;19836 | chr2:178620293;178620292;178620291 | chr2:179485020;179485019;179485018 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1450114008 | None | 0.014 | N | 0.337 | 0.382 | 0.388970301349 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.95E-05 | 0 | 0 |
F/L | rs1450114008 | None | 0.014 | N | 0.337 | 0.382 | 0.388970301349 | gnomAD-4.0.0 | 1.31643E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.94516E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9983 | likely_pathogenic | 0.9986 | pathogenic | -2.274 | Highly Destabilizing | 0.86 | D | 0.773 | deleterious | None | None | None | None | N |
F/C | 0.9928 | likely_pathogenic | 0.9959 | pathogenic | -0.984 | Destabilizing | 0.997 | D | 0.827 | deleterious | D | 0.747976259 | None | None | N |
F/D | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.992 | Highly Destabilizing | 0.993 | D | 0.855 | deleterious | None | None | None | None | N |
F/E | 0.9998 | likely_pathogenic | 0.9998 | pathogenic | -2.732 | Highly Destabilizing | 0.978 | D | 0.855 | deleterious | None | None | None | None | N |
F/G | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -2.753 | Highly Destabilizing | 0.978 | D | 0.849 | deleterious | None | None | None | None | N |
F/H | 0.9974 | likely_pathogenic | 0.9982 | pathogenic | -1.864 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
F/I | 0.939 | likely_pathogenic | 0.9619 | pathogenic | -0.701 | Destabilizing | 0.698 | D | 0.646 | neutral | D | 0.607812486 | None | None | N |
F/K | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -1.616 | Destabilizing | 0.978 | D | 0.852 | deleterious | None | None | None | None | N |
F/L | 0.9774 | likely_pathogenic | 0.9806 | pathogenic | -0.701 | Destabilizing | 0.014 | N | 0.337 | neutral | N | 0.495802874 | None | None | N |
F/M | 0.9501 | likely_pathogenic | 0.9652 | pathogenic | -0.477 | Destabilizing | 0.956 | D | 0.697 | prob.neutral | None | None | None | None | N |
F/N | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -2.306 | Highly Destabilizing | 0.993 | D | 0.852 | deleterious | None | None | None | None | N |
F/P | 1.0 | likely_pathogenic | 1.0 | pathogenic | -1.24 | Destabilizing | 0.993 | D | 0.86 | deleterious | None | None | None | None | N |
F/Q | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -2.051 | Highly Destabilizing | 0.993 | D | 0.859 | deleterious | None | None | None | None | N |
F/R | 0.9989 | likely_pathogenic | 0.999 | pathogenic | -1.653 | Destabilizing | 0.978 | D | 0.848 | deleterious | None | None | None | None | N |
F/S | 0.9989 | likely_pathogenic | 0.9993 | pathogenic | -2.745 | Highly Destabilizing | 0.971 | D | 0.828 | deleterious | D | 0.747976259 | None | None | N |
F/T | 0.9991 | likely_pathogenic | 0.9994 | pathogenic | -2.354 | Highly Destabilizing | 0.956 | D | 0.819 | deleterious | None | None | None | None | N |
F/V | 0.9649 | likely_pathogenic | 0.9788 | pathogenic | -1.24 | Destabilizing | 0.698 | D | 0.688 | prob.neutral | D | 0.632957411 | None | None | N |
F/W | 0.9761 | likely_pathogenic | 0.9826 | pathogenic | 0.031 | Stabilizing | 0.998 | D | 0.676 | prob.neutral | None | None | None | None | N |
F/Y | 0.8279 | likely_pathogenic | 0.8593 | pathogenic | -0.386 | Destabilizing | 0.904 | D | 0.602 | neutral | D | 0.710398604 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.