Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15413 | 46462;46463;46464 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
N2AB | 13772 | 41539;41540;41541 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
N2A | 12845 | 38758;38759;38760 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
N2B | 6348 | 19267;19268;19269 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
Novex-1 | 6473 | 19642;19643;19644 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
Novex-2 | 6540 | 19843;19844;19845 | chr2:178620284;178620283;178620282 | chr2:179485011;179485010;179485009 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs878864622 | None | 0.704 | N | 0.505 | 0.308 | None | gnomAD-4.0.0 | 2.14504E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.77101E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.3542 | ambiguous | 0.3834 | ambiguous | -0.765 | Destabilizing | 0.863 | D | 0.48 | neutral | None | None | None | None | N |
Q/C | 0.7338 | likely_pathogenic | 0.8088 | pathogenic | -0.256 | Destabilizing | 0.999 | D | 0.613 | neutral | None | None | None | None | N |
Q/D | 0.6947 | likely_pathogenic | 0.7777 | pathogenic | -0.925 | Destabilizing | 0.759 | D | 0.5 | neutral | None | None | None | None | N |
Q/E | 0.14 | likely_benign | 0.147 | benign | -0.798 | Destabilizing | 0.021 | N | 0.147 | neutral | N | 0.380985487 | None | None | N |
Q/F | 0.7428 | likely_pathogenic | 0.795 | pathogenic | -0.44 | Destabilizing | 0.997 | D | 0.615 | neutral | None | None | None | None | N |
Q/G | 0.5293 | ambiguous | 0.6139 | pathogenic | -1.134 | Destabilizing | 0.969 | D | 0.577 | neutral | None | None | None | None | N |
Q/H | 0.2728 | likely_benign | 0.3429 | ambiguous | -0.943 | Destabilizing | 0.996 | D | 0.521 | neutral | N | 0.513326035 | None | None | N |
Q/I | 0.4292 | ambiguous | 0.4942 | ambiguous | 0.187 | Stabilizing | 0.997 | D | 0.629 | neutral | None | None | None | None | N |
Q/K | 0.1007 | likely_benign | 0.1164 | benign | -0.387 | Destabilizing | 0.061 | N | 0.167 | neutral | N | 0.428417511 | None | None | N |
Q/L | 0.2283 | likely_benign | 0.2761 | benign | 0.187 | Stabilizing | 0.959 | D | 0.589 | neutral | N | 0.514744982 | None | None | N |
Q/M | 0.455 | ambiguous | 0.4881 | ambiguous | 0.608 | Stabilizing | 0.997 | D | 0.515 | neutral | None | None | None | None | N |
Q/N | 0.4375 | ambiguous | 0.5238 | ambiguous | -1.022 | Destabilizing | 0.969 | D | 0.493 | neutral | None | None | None | None | N |
Q/P | 0.7626 | likely_pathogenic | 0.893 | pathogenic | -0.1 | Destabilizing | 0.986 | D | 0.539 | neutral | D | 0.562697157 | None | None | N |
Q/R | 0.1119 | likely_benign | 0.1309 | benign | -0.33 | Destabilizing | 0.704 | D | 0.505 | neutral | N | 0.490068566 | None | None | N |
Q/S | 0.354 | ambiguous | 0.3901 | ambiguous | -1.164 | Destabilizing | 0.863 | D | 0.51 | neutral | None | None | None | None | N |
Q/T | 0.2676 | likely_benign | 0.2874 | benign | -0.842 | Destabilizing | 0.969 | D | 0.547 | neutral | None | None | None | None | N |
Q/V | 0.3089 | likely_benign | 0.3417 | ambiguous | -0.1 | Destabilizing | 0.969 | D | 0.561 | neutral | None | None | None | None | N |
Q/W | 0.7636 | likely_pathogenic | 0.8152 | pathogenic | -0.312 | Destabilizing | 0.999 | D | 0.59 | neutral | None | None | None | None | N |
Q/Y | 0.5874 | likely_pathogenic | 0.6674 | pathogenic | -0.054 | Destabilizing | 0.997 | D | 0.559 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.