Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15414 | 46465;46466;46467 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
N2AB | 13773 | 41542;41543;41544 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
N2A | 12846 | 38761;38762;38763 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
N2B | 6349 | 19270;19271;19272 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
Novex-1 | 6474 | 19645;19646;19647 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
Novex-2 | 6541 | 19846;19847;19848 | chr2:178620281;178620280;178620279 | chr2:179485008;179485007;179485006 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | D | 0.825 | 0.776 | 0.890016908248 | gnomAD-4.0.0 | 7.16396E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.24618E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9206 | likely_pathogenic | 0.9527 | pathogenic | -2.75 | Highly Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | N |
L/C | 0.921 | likely_pathogenic | 0.9524 | pathogenic | -2.331 | Highly Destabilizing | 1.0 | D | 0.824 | deleterious | None | None | None | None | N |
L/D | 0.998 | likely_pathogenic | 0.9991 | pathogenic | -3.381 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
L/E | 0.9891 | likely_pathogenic | 0.9943 | pathogenic | -3.196 | Highly Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
L/F | 0.6565 | likely_pathogenic | 0.815 | pathogenic | -1.583 | Destabilizing | 1.0 | D | 0.81 | deleterious | D | 0.564039147 | None | None | N |
L/G | 0.9843 | likely_pathogenic | 0.9913 | pathogenic | -3.244 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
L/H | 0.9745 | likely_pathogenic | 0.9878 | pathogenic | -2.54 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | D | 0.69256767 | None | None | N |
L/I | 0.2034 | likely_benign | 0.2371 | benign | -1.321 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.498738171 | None | None | N |
L/K | 0.9801 | likely_pathogenic | 0.9868 | pathogenic | -2.101 | Highly Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
L/M | 0.3891 | ambiguous | 0.4939 | ambiguous | -1.438 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/N | 0.9854 | likely_pathogenic | 0.9923 | pathogenic | -2.426 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/P | 0.9819 | likely_pathogenic | 0.993 | pathogenic | -1.78 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.632229108 | None | None | N |
L/Q | 0.9659 | likely_pathogenic | 0.9834 | pathogenic | -2.366 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/R | 0.9698 | likely_pathogenic | 0.981 | pathogenic | -1.696 | Destabilizing | 1.0 | D | 0.82 | deleterious | D | 0.69256767 | None | None | N |
L/S | 0.9833 | likely_pathogenic | 0.9915 | pathogenic | -3.064 | Highly Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/T | 0.8932 | likely_pathogenic | 0.9141 | pathogenic | -2.749 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/V | 0.196 | likely_benign | 0.2386 | benign | -1.78 | Destabilizing | 0.999 | D | 0.521 | neutral | N | 0.464368839 | None | None | N |
L/W | 0.9681 | likely_pathogenic | 0.987 | pathogenic | -1.94 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
L/Y | 0.9586 | likely_pathogenic | 0.9832 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.