Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15416 | 46471;46472;46473 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
N2AB | 13775 | 41548;41549;41550 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
N2A | 12848 | 38767;38768;38769 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
N2B | 6351 | 19276;19277;19278 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
Novex-1 | 6476 | 19651;19652;19653 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
Novex-2 | 6543 | 19852;19853;19854 | chr2:178620275;178620274;178620273 | chr2:179485002;179485001;179485000 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.801 | N | 0.377 | 0.317 | 0.609094465904 | gnomAD-4.0.0 | 2.15149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.77486E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.5302 | ambiguous | 0.7525 | pathogenic | -0.131 | Destabilizing | 0.688 | D | 0.369 | neutral | None | None | None | None | N |
R/C | 0.4517 | ambiguous | 0.6109 | pathogenic | -0.229 | Destabilizing | 0.998 | D | 0.375 | neutral | None | None | None | None | N |
R/D | 0.8073 | likely_pathogenic | 0.9149 | pathogenic | 0.074 | Stabilizing | 0.842 | D | 0.396 | neutral | None | None | None | None | N |
R/E | 0.4989 | ambiguous | 0.6663 | pathogenic | 0.14 | Stabilizing | 0.525 | D | 0.387 | neutral | None | None | None | None | N |
R/F | 0.8158 | likely_pathogenic | 0.9053 | pathogenic | -0.349 | Destabilizing | 0.991 | D | 0.407 | neutral | None | None | None | None | N |
R/G | 0.3429 | ambiguous | 0.5716 | pathogenic | -0.333 | Destabilizing | 0.801 | D | 0.337 | neutral | N | 0.426029143 | None | None | N |
R/H | 0.2302 | likely_benign | 0.3166 | benign | -0.762 | Destabilizing | 0.991 | D | 0.375 | neutral | None | None | None | None | N |
R/I | 0.5108 | ambiguous | 0.6507 | pathogenic | 0.368 | Stabilizing | 0.966 | D | 0.431 | neutral | N | 0.509480767 | None | None | N |
R/K | 0.0887 | likely_benign | 0.1295 | benign | -0.097 | Destabilizing | 0.002 | N | 0.105 | neutral | N | 0.367671264 | None | None | N |
R/L | 0.4331 | ambiguous | 0.5746 | pathogenic | 0.368 | Stabilizing | 0.842 | D | 0.337 | neutral | None | None | None | None | N |
R/M | 0.4535 | ambiguous | 0.6307 | pathogenic | 0.003 | Stabilizing | 0.991 | D | 0.401 | neutral | None | None | None | None | N |
R/N | 0.7029 | likely_pathogenic | 0.8688 | pathogenic | 0.195 | Stabilizing | 0.842 | D | 0.333 | neutral | None | None | None | None | N |
R/P | 0.8294 | likely_pathogenic | 0.9053 | pathogenic | 0.222 | Stabilizing | 0.915 | D | 0.419 | neutral | None | None | None | None | N |
R/Q | 0.1639 | likely_benign | 0.2385 | benign | 0.05 | Stabilizing | 0.842 | D | 0.371 | neutral | None | None | None | None | N |
R/S | 0.641 | likely_pathogenic | 0.8311 | pathogenic | -0.279 | Destabilizing | 0.625 | D | 0.341 | neutral | N | 0.465491695 | None | None | N |
R/T | 0.3991 | ambiguous | 0.6081 | pathogenic | -0.072 | Destabilizing | 0.801 | D | 0.377 | neutral | N | 0.499318899 | None | None | N |
R/V | 0.5694 | likely_pathogenic | 0.7183 | pathogenic | 0.222 | Stabilizing | 0.915 | D | 0.459 | neutral | None | None | None | None | N |
R/W | 0.4492 | ambiguous | 0.5561 | ambiguous | -0.337 | Destabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | N |
R/Y | 0.7253 | likely_pathogenic | 0.8499 | pathogenic | 0.07 | Stabilizing | 0.991 | D | 0.392 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.