Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1542 | 4849;4850;4851 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
N2AB | 1542 | 4849;4850;4851 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
N2A | 1542 | 4849;4850;4851 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
N2B | 1496 | 4711;4712;4713 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
Novex-1 | 1496 | 4711;4712;4713 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
Novex-2 | 1496 | 4711;4712;4713 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
Novex-3 | 1542 | 4849;4850;4851 | chr2:178777441;178777440;178777439 | chr2:179642168;179642167;179642166 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.103 | D | 0.283 | 0.303 | 0.340273420219 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85745E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0801 | likely_benign | 0.0862 | benign | -0.389 | Destabilizing | 0.103 | N | 0.283 | neutral | D | 0.530081428 | None | None | I |
S/C | 0.211 | likely_benign | 0.2227 | benign | -0.399 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/D | 0.5205 | ambiguous | 0.5839 | pathogenic | 0.294 | Stabilizing | 0.919 | D | 0.559 | neutral | None | None | None | None | I |
S/E | 0.6393 | likely_pathogenic | 0.6907 | pathogenic | 0.24 | Stabilizing | 0.919 | D | 0.571 | neutral | None | None | None | None | I |
S/F | 0.4517 | ambiguous | 0.4819 | ambiguous | -0.83 | Destabilizing | 0.988 | D | 0.815 | deleterious | None | None | None | None | I |
S/G | 0.1216 | likely_benign | 0.1376 | benign | -0.558 | Destabilizing | 0.919 | D | 0.569 | neutral | None | None | None | None | I |
S/H | 0.4265 | ambiguous | 0.4715 | ambiguous | -1.053 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | I |
S/I | 0.4425 | ambiguous | 0.4652 | ambiguous | -0.071 | Destabilizing | 0.976 | D | 0.79 | deleterious | None | None | None | None | I |
S/K | 0.6371 | likely_pathogenic | 0.6868 | pathogenic | -0.446 | Destabilizing | 0.919 | D | 0.571 | neutral | None | None | None | None | I |
S/L | 0.2288 | likely_benign | 0.244 | benign | -0.071 | Destabilizing | 0.811 | D | 0.727 | prob.delet. | D | 0.637474518 | None | None | I |
S/M | 0.3722 | ambiguous | 0.3991 | ambiguous | 0.031 | Stabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
S/N | 0.1877 | likely_benign | 0.2168 | benign | -0.32 | Destabilizing | 0.919 | D | 0.576 | neutral | None | None | None | None | I |
S/P | 0.3004 | likely_benign | 0.3891 | ambiguous | -0.145 | Destabilizing | 0.984 | D | 0.725 | prob.delet. | D | 0.577342597 | None | None | I |
S/Q | 0.5407 | ambiguous | 0.5903 | pathogenic | -0.484 | Destabilizing | 0.988 | D | 0.604 | neutral | None | None | None | None | I |
S/R | 0.5556 | ambiguous | 0.6027 | pathogenic | -0.331 | Destabilizing | 0.976 | D | 0.735 | prob.delet. | None | None | None | None | I |
S/T | 0.0941 | likely_benign | 0.0993 | benign | -0.386 | Destabilizing | 0.046 | N | 0.238 | neutral | N | 0.486906618 | None | None | I |
S/V | 0.3441 | ambiguous | 0.3725 | ambiguous | -0.145 | Destabilizing | 0.851 | D | 0.75 | deleterious | None | None | None | None | I |
S/W | 0.6361 | likely_pathogenic | 0.6537 | pathogenic | -0.834 | Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | I |
S/Y | 0.4088 | ambiguous | 0.422 | ambiguous | -0.541 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.