Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15428 | 46507;46508;46509 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
N2AB | 13787 | 41584;41585;41586 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
N2A | 12860 | 38803;38804;38805 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
N2B | 6363 | 19312;19313;19314 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
Novex-1 | 6488 | 19687;19688;19689 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
Novex-2 | 6555 | 19888;19889;19890 | chr2:178620239;178620238;178620237 | chr2:179484966;179484965;179484964 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs2058065577 | None | 0.997 | N | 0.588 | 0.32 | 0.509878532422 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.7208 | likely_pathogenic | 0.7456 | pathogenic | 0.082 | Stabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | N |
R/C | 0.4989 | ambiguous | 0.4932 | ambiguous | -0.13 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
R/D | 0.8689 | likely_pathogenic | 0.8691 | pathogenic | -0.151 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
R/E | 0.5639 | ambiguous | 0.5828 | pathogenic | -0.096 | Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
R/F | 0.7779 | likely_pathogenic | 0.8068 | pathogenic | -0.184 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
R/G | 0.6423 | likely_pathogenic | 0.6773 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.625 | neutral | D | 0.576809989 | None | None | N |
R/H | 0.2044 | likely_benign | 0.204 | benign | -0.584 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
R/I | 0.4507 | ambiguous | 0.4646 | ambiguous | 0.491 | Stabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.511578919 | None | None | N |
R/K | 0.1204 | likely_benign | 0.1263 | benign | -0.031 | Destabilizing | 0.997 | D | 0.588 | neutral | N | 0.482003615 | None | None | N |
R/L | 0.4977 | ambiguous | 0.5255 | ambiguous | 0.491 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
R/M | 0.4908 | ambiguous | 0.523 | ambiguous | 0.035 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/N | 0.7684 | likely_pathogenic | 0.7788 | pathogenic | 0.114 | Stabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
R/P | 0.9709 | likely_pathogenic | 0.9757 | pathogenic | 0.374 | Stabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
R/Q | 0.171 | likely_benign | 0.1774 | benign | 0.051 | Stabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
R/S | 0.7894 | likely_pathogenic | 0.8153 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | N | 0.500877172 | None | None | N |
R/T | 0.5304 | ambiguous | 0.5477 | ambiguous | 0.035 | Stabilizing | 1.0 | D | 0.669 | neutral | N | 0.509488873 | None | None | N |
R/V | 0.5667 | likely_pathogenic | 0.5829 | pathogenic | 0.374 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
R/W | 0.3911 | ambiguous | 0.4137 | ambiguous | -0.313 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
R/Y | 0.6589 | likely_pathogenic | 0.675 | pathogenic | 0.105 | Stabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.